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Report for CCDS24262.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
24262.1 Public Mus musculus 10 Rbms2 23 108 98 CCDS HistoryNCBI Gene:56516Re-query CCDS DB by CCDS ID:24262.1Re-query CCDS DB by GeneID:56516See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 24262.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000099139.8 ENSMUSP00000096742.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000099139.8Link to Ensembl Protein Viewer:ENSMUSP00000096742.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000099139Re-query CCDS DB by Protein ID:ENSMUSP00000096742
Original member NCBI NM_001039080.1 NP_001034169.1 Updated not alive Link to Nucleotide Sequence:NM_001039080.1Link to Protein Sequence:NP_001034169.1Re-query CCDS DB by Nucleotide ID:NM_001039080Re-query CCDS DB by Protein ID:NP_001034169
Current member NCBI NM_001039080.2 NP_001034169.1 Accepted alive Link to Nucleotide Sequence:NM_001039080.2Link to Protein Sequence:NP_001034169.1Re-query CCDS DB by Nucleotide ID:NM_001039080Re-query CCDS DB by Protein ID:NP_001034169Link to BLAST:NP_001034169.1

Chromosomal Locations for CCDS 24262.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 10 (NC_000076.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 128133645 128133725 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 128134128 128134208 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 128134997 128135107 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 128137474 128137567 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 128137661 128137707 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 128137920 128138029 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 128138118 128138197 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 128143395 128143552 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 128145673 128145764 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 128146602 128146660 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 128151183 128151337 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1068 nt):
ATGGCACCTCCAAGTCCAAGGAATAGCACCCCCAACAGCAGCGGCGGAGGCGGCGGCGGGAGTGGTGGGA
ACGACCAGCTGAGCAAAACCAACCTGTATATCCGAGGACTGCAGCCAGGCACCACTGACCAGGACCTTGT
CAAGCTCTGTCAGCCGTATGGCAAGATTGTCTCCACTAAGGCCATCCTGGACAAGACCACAAACAAGTGC
AAAGGCTATGGCTTTGTGGACTTCGACAGTCCGTCATCAGCACAGAAAGCTGTAACTGCACTGAAAGCCA
GTGGTGTGCAGGCACAAATGGCAAAGCAACAGGAGCAAGACCCTACAAACTTATACATCTCAAACCTCCC
TCTGTCAATGGACGAGCAGGAACTGGAGGGGATGCTGAAGCCCTTTGGCCAGGTCATCTCTACTCGGATC
CTTCGAGACACTAGTGGGGCCAGCAGAGGGGTCGGCTTTGCAAGGATGGAGTCAACAGAGAAGTGTGAAG
CCATCATCACCCACTTTAATGGAAAGTATATAAAGACACCCCCTGGAGTAGCAGCACCTTCTGACCCTTT
GCTTTGCAAATTTGCTGACGGTGGGCCAAAGAAACGACAGAGCCAAGGAAGATACGTGCAAAATGGACGG
GCCTGGCCAAGGAACGGAGACATGGGCGGTATGGCCTTGACCTATGACCCCACTGCTGCCCTTCAGAATG
GGTTCTACGCAGCTCCTTACAGTATCGCCCACAGCAGGATGCTTGCTCAATCTGCGCTAGCCCCGTATCT
TCCATCTCCTGTGTCTTCCTATCAGGGCTCAGTTCTGACACCAGGGATGGACCACCCCCTCTCTCTCCAG
CCTGCCTCCATGATGGGACCTCTTACCCAGCAACTGGGTCACCTGTCACTCAACAGTCTGGGCACGTTCA
TGCCGGCAGCTGCTGCTATGCATGGGGCTTACATCTCCCAGTACCCAGCTGTGCCTTCTTCCAGTGTTTC
TGCTGAGGAGAGCAATGGCCAGCAGAATCAACTGGCAGTGGAGCCCCCCTCAGACCACGGGGTCTATCCT
TTCCAGTTCAGCAAATAA

Translation (355 aa):
MAPPSPRNSTPNSSGGGGGGSGGNDQLSKTNLYIRGLQPGTTDQDLVKLCQPYGKIVSTKAILDKTTNKC
KGYGFVDFDSPSSAQKAVTALKASGVQAQMAKQQEQDPTNLYISNLPLSMDEQELEGMLKPFGQVISTRI
LRDTSGASRGVGFARMESTEKCEAIITHFNGKYIKTPPGVAAPSDPLLCKFADGGPKKRQSQGRYVQNGR
AWPRNGDMGGMALTYDPTAALQNGFYAAPYSIAHSRMLAQSALAPYLPSPVSSYQGSVLTPGMDHPLSLQ
PASMMGPLTQQLGHLSLNSLGTFMPAAAAMHGAYISQYPAVPSSSVSAEESNGQQNQLAVEPPSDHGVYP
FQFSK


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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