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Report for CCDS24060.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
24060.1 Public Mus musculus 10 Gna15 23 108 98 CCDS HistoryNCBI Gene:14676Re-query CCDS DB by CCDS ID:24060.1Re-query CCDS DB by GeneID:14676See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 24060.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000043709.7 ENSMUSP00000049175.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000043709.7Link to Ensembl Protein Viewer:ENSMUSP00000049175.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000043709Re-query CCDS DB by Protein ID:ENSMUSP00000049175
Original member Current member NCBI NM_010304.3 NP_034434.1 Accepted alive Link to Nucleotide Sequence:NM_010304.3Link to Protein Sequence:NP_034434.1Re-query CCDS DB by Nucleotide ID:NM_010304Re-query CCDS DB by Protein ID:NP_034434Link to BLAST:NP_034434.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_034434.1 374 P30678 374 100% 0 0

Chromosomal Locations for CCDS 24060.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 10 (NC_000076.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 81502879 81503105 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 81507928 81508081 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 81509286 81509415 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 81511997 81512125 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 81512411 81512565 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 81514237 81514421 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 81523810 81523954 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1125 nt):
ATGGCCCGGTCCCTGACTTGGGGCTGCTGTCCCTGGTGCCTGACAGAGGAGGAGAAGACTGCCGCCAGAA
TCGACCAGGAGATCAACAGGATTTTGTTGGAACAGAAAAAACAAGAGCGCGAGGAATTGAAACTCCTGCT
GTTGGGGCCTGGTGAGAGCGGGAAGAGTACGTTCATCAAGCAGATGCGCATCATTCACGGTGTGGGCTAC
TCGGAGGAGGACCGCAGAGCCTTCCGGCTGCTCATCTACCAGAACATCTTCGTCTCCATGCAGGCCATGA
TAGATGCGATGGACCGGCTGCAGATCCCCTTCAGCAGGCCTGACAGCAAGCAGCACGCCAGCCTAGTGAT
GACCCAGGACCCCTATAAAGTGAGCACATTCGAGAAGCCATATGCAGTGGCCATGCAGTACCTGTGGCGG
GACGCGGGCATCCGTGCATGCTACGAGCGAAGGCGTGAATTCCACCTTCTGGACTCCGCGGTGTATTACC
TGTCACACCTGGAGCGCATATCAGAGGACAGCTACATCCCCACTGCGCAAGACGTGCTGCGCAGTCGCAT
GCCCACCACAGGCATCAATGAGTACTGCTTCTCCGTGAAGAAAACCAAACTGCGCATCGTGGATGTTGGT
GGCCAGAGGTCAGAGCGTAGGAAATGGATTCACTGTTTCGAGAACGTGATTGCCCTCATCTACCTGGCCT
CCCTGAGCGAGTATGACCAGTGCCTAGAGGAGAACGATCAGGAGAACCGCATGGAGGAGAGTCTCGCTCT
GTTCAGCACGATCCTAGAGCTGCCCTGGTTCAAGAGCACCTCGGTCATCCTCTTCCTCAACAAGACGGAC
ATCCTGGAAGATAAGATTCACACCTCCCACCTGGCCACATACTTCCCCAGCTTCCAGGGACCCCGGCGAG
ACGCAGAGGCCGCCAAGAGCTTCATCTTGGACATGTATGCGCGCGTGTACGCGAGCTGCGCAGAGCCCCA
GGACGGTGGCAGGAAAGGCTCCCGCGCGCGCCGCTTCTTCGCACACTTCACCTGTGCCACGGACACGCAA
AGCGTCCGCAGCGTGTTCAAGGACGTGCGGGACTCGGTGCTGGCCCGGTACCTGGACGAGATCAACCTGC
TGTGA

Translation (374 aa):
MARSLTWGCCPWCLTEEEKTAARIDQEINRILLEQKKQEREELKLLLLGPGESGKSTFIKQMRIIHGVGY
SEEDRRAFRLLIYQNIFVSMQAMIDAMDRLQIPFSRPDSKQHASLVMTQDPYKVSTFEKPYAVAMQYLWR
DAGIRACYERRREFHLLDSAVYYLSHLERISEDSYIPTAQDVLRSRMPTTGINEYCFSVKKTKLRIVDVG
GQRSERRKWIHCFENVIALIYLASLSEYDQCLEENDQENRMEESLALFSTILELPWFKSTSVILFLNKTD
ILEDKIHTSHLATYFPSFQGPRRDAEAAKSFILDMYARVYASCAEPQDGGRKGSRARRFFAHFTCATDTQ
SVRSVFKDVRDSVLARYLDEINLL


Links Key
 Links to:   History report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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