CCDS Home FTP Process Releases & Statistics
Collaborators EBI HGNC MGI NCBI
Contact Us email CCDS
Genome Displays Related Resources Gene HomoloGene MANE RefSeq
|
|
Report for CCDS23927.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
23927.1 |
Public |
Mus musculus |
10 |
Ggt1 |
23 |
108 |
98 |
|
Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 23927.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
Status in CCDS |
Seq. Status |
Links |
---|
|
|
EBI |
ENSMUST00000006508.9 |
ENSMUSP00000006508.3 |
Accepted |
alive |
|
|
|
EBI |
ENSMUST00000134503.7 |
ENSMUSP00000121312.1 |
Accepted |
alive |
|
|
|
NCBI |
NM_001305992.1 |
NP_001292921.1 |
Updated |
not alive |
|
|
|
NCBI |
NM_001305992.2 |
NP_001292921.1 |
Accepted |
alive |
|
|
|
NCBI |
NM_008116.3 |
NP_032142.1 |
Updated |
not alive |
|
|
|
NCBI |
NM_008116.4 |
NP_032142.1 |
Accepted |
alive |
|
Chromosomal Locations for CCDS 23927.1
Assembly GRCm38.p6 (GCF_000001635.26)
CCDS Sequence Data |
---|
Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (1707 nt): ATGAAGAATCGGTTTCTGGTGCTGGGCCTGGTGGCTGTGGTTCTGGTATTTGTCATCATCGGCCTCTGTA TCTGGTTGCCCTACACCTCTGGGAAGCCCGACCACGTGTACTCCAGGGCGGCGGTGGCCACCGACGCCAA GCGCTGCTCAGAGATTGGACGGGATATCCTACAGGAAGGTGGTTCCGTGGTGGATGCAGCCATCGCAAGC CTGCTGTGTATGGGGCTCATGAATGCCCACAGTATGGGCATCGGGGGCGGCCTGTTCTTCACCATCTACA ACAGCACCACAGGAAAAGTTGAGGTTATCAATGCCCGTGAGGTAGCTCCCAGGTTGGCCAATACCACCAT GTTCAACAACTCCAAGGACTCTGAAGAAGGTGGCCTTTCAGTGGCTGTCCCTGGTGAAATCCGTGGTTAT GAGCTGGCACACCAACGACACGGCCGGCTCCCCTGGGCTCGCCTCTTCCAACCCAGCATCCAGCTGGCTC GCCACGGCTTCCCTGTGGGCAAGGGTTTGGCAATAGCCCTGGACAAAAAACGGGACGTCATTGAGAAGAC CCCTGCCTTGTGCGAGGTGTTCTGCCGCCAAGGGAAGGTGCTTCAAGAAGGAGAGACGGTGACTATGCCG AAGCTGGCTGACACATTGCAGATACTGGCCCAGGAGGGCGCCAAGGCCTTCTACAATGGGAGCCTCACAG CCCAGATTGTGAAAGACATCCAGGAGGCTGGTGGCATTATGACGGTTGAGGACCTCAACAACTACCGTGC TGAGCTGATTGAGCATCCGATGAGCATCGGCCTCGGTGATGCGACCCTGTACGTGCCCAGTGCCCCACTC AGCGGGCCCGTGCTGATTCTCATCTTGAACATCCTCAAAGGATACAACTTCTCTCCGAAGAGCGTAGCGA CCCCTGAACAGAAGGCACTGACGTATCACCGTATCGTGGAGGCCTTTCGGTTTGCCTATGCCAAGAGGAC CATGCTCGGTGACCCAAAGTTTGTCGATGTGTCTCAGGTGATCCGCAACATGAGCTCTGAGTTCTACGCC ACCCAGCTCCGAGCCCGCATCACTGATGAAACCACCCACCCAGCCGCCTACTATGAGCCTGAATTCTACC TTCAGGATGATGGAGGCACCGCTCACCTGTCTGCGGTTTCAGAGGATGGCAGTGCTGTGGCTGCCACTAG TACCATCAACCTCTACTTTGGCTCCAAGGTCCTGTCTCGGGTCAGTGGCATCCTGTTTAATGATGAGATG GATGACTTCAGCTCGCCCAACTTCATCAACCAGTTCAGGGTAGCCCCCTCACCAGCCAACTTCATCAAGC CAGGTAAGCAGCCTCTTTCATCCATGTGTCCCTCAATCATCCTGGATAAGGACGGCCAGGTTCGCATGGT GGTCGGAGCCTCAGGGGGTACCCAGATCACCACATCTGTTGCACTGGCCATCATCAACAGCCTGTGGTTC GGATACGATGTGAAGAGAGCTGTGGAGGAGCCCCGGCTGCACAACCAGCTTTTACCTAATACCACAACGG TAGAGAAAGACATTGATCAGGTGGTGACTGCAGGCCTGAAGATTCGGCACCACCATACAGAAGTCACGCC CACCTTCATCGCTGTAGTTCAGGCTGTCGTTCGAGCATCAGGTGGTTGGGCAGCTGCCTCAGACTCCAGA AAAGGCGGGGAACCTGCTGGCTACTGA
Translation (568 aa): MKNRFLVLGLVAVVLVFVIIGLCIWLPYTSGKPDHVYSRAAVATDAKRCSEIGRDILQEGGSVVDAAIAS LLCMGLMNAHSMGIGGGLFFTIYNSTTGKVEVINAREVAPRLANTTMFNNSKDSEEGGLSVAVPGEIRGY ELAHQRHGRLPWARLFQPSIQLARHGFPVGKGLAIALDKKRDVIEKTPALCEVFCRQGKVLQEGETVTMP KLADTLQILAQEGAKAFYNGSLTAQIVKDIQEAGGIMTVEDLNNYRAELIEHPMSIGLGDATLYVPSAPL SGPVLILILNILKGYNFSPKSVATPEQKALTYHRIVEAFRFAYAKRTMLGDPKFVDVSQVIRNMSSEFYA TQLRARITDETTHPAAYYEPEFYLQDDGGTAHLSAVSEDGSAVAATSTINLYFGSKVLSRVSGILFNDEM DDFSSPNFINQFRVAPSPANFIKPGKQPLSSMCPSIILDKDGQVRMVVGASGGTQITTSVALAIINSLWF GYDVKRAVEEPRLHNQLLPNTTTVEKDIDQVVTAGLKIRHHHTEVTPTFIAVVQAVVRASGGWAAASDSR KGGEPAGY
|