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Report for CCDS23756.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
23756.1 Public Mus musculus 10 L3mbtl3 23 108 98 CCDS HistoryNCBI Gene:237339Re-query CCDS DB by CCDS ID:23756.1Re-query CCDS DB by GeneID:237339See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 23756.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000040219.12 ENSMUSP00000037619.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000040219.12Link to Ensembl Protein Viewer:ENSMUSP00000037619.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000040219Re-query CCDS DB by Protein ID:ENSMUSP00000037619
Original member Current member EBI ENSMUST00000174766.1 ENSMUSP00000133479.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000174766.1Link to Ensembl Protein Viewer:ENSMUSP00000133479.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000174766Re-query CCDS DB by Protein ID:ENSMUSP00000133479
Original member NCBI NM_001359254.1 NP_001346183.1 Updated not alive Link to Nucleotide Sequence:NM_001359254.1Link to Protein Sequence:NP_001346183.1Re-query CCDS DB by Nucleotide ID:NM_001359254Re-query CCDS DB by Protein ID:NP_001346183
Current member NCBI NM_001359254.2 NP_001346183.1 Accepted alive Link to Nucleotide Sequence:NM_001359254.2Link to Protein Sequence:NP_001346183.1Re-query CCDS DB by Nucleotide ID:NM_001359254Re-query CCDS DB by Protein ID:NP_001346183Link to BLAST:NP_001346183.1
Original member NCBI NM_172787.3 NP_766375.1 Updated not alive Link to Nucleotide Sequence:NM_172787.3Link to Protein Sequence:NP_766375.1Re-query CCDS DB by Nucleotide ID:NM_172787Re-query CCDS DB by Protein ID:NP_766375
Current member NCBI NM_172787.4 NP_766375.1 Accepted alive Link to Nucleotide Sequence:NM_172787.4Link to Protein Sequence:NP_766375.1Re-query CCDS DB by Nucleotide ID:NM_172787Re-query CCDS DB by Protein ID:NP_766375Link to BLAST:NP_766375.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001346183.1 883 Q8BLB7-1 883 100% 0 0
NP_766375.1 883 Q8BLB7-1 883 100% 0 0

Chromosomal Locations for CCDS 23756.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 10 (NC_000076.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 26276120 26276263 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 26279617 26279679 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 26279938 26280413 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 26282780 26282859 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 26292641 26292793 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 26302653 26302755 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 26303623 26303737 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 26313847 26313957 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 26315492 26315577 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 26318377 26318453 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 26327687 26327838 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 26330175 26330266 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 26331820 26331955 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 26336233 26336337 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 26337768 26337859 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 26339219 26339303 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 26340908 26341040 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 26342508 26342667 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 26344177 26344251 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 26344612 26344723 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 26352259 26352360 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2652 nt):
ATGACTGAATCTGCATCTAGCACAAGTGGTCAAGAGTTTGATGTGTTTAGTGTTATGGACTGGAAGGATG
GCGTTGGTACCCTACCAGGGAGTGATTTAAAGTTTCGAGTAAATGAGTTTGGAGCTTTGGAAGTTATCAC
AGACGAAAGCGAGATGGAAAGTGTTAAGAAAGCTACAGCCACTACCACATGGATGGTCCCAACTGCTCAA
GACGCCCCGACTTCTCCCCCGAGCTCCAGGCCCGTATTTCCACCTGCCTACTGGACATCTCCACCTGGAT
GTCCCACAGTCTTTTCAGAGAAGACTGGGGTACCCTTCAGGCTGAAGGAGCAATCAAAAGCAGACGGGCT
TCAGTTTTGTGAGAACTGTTGTCAGTATGGCAACGGAGATGAATGTCTTTCGGGAGGAAAGTATTGCAGC
CAGAATTGTGCTCGGCATGCCAAAGACAAAGATCAAAAGGATGAACGGGATGGAGGCGAAGACAACGATG
AGGAAGATCCTAAGTGTAGTCGAAAGAAAAAGCCAAAATTGTCTCTGAAGGCGGACTCCAAGGACGATGG
AGAAGAGAGAGATGATGAAATGGAGAACAAACAAGATGGAAGGATCCTGAGGGGTTCTCAGAGAGCCAGA
AGGAAAAGACGCGGGGATTCTGCCGTCTTAAAGCAAGGCTTGCCTCCTAAAGGCAAGAAGACCTGGTGTT
GGGCTTCCTACCTGGAGGAGGAGAAAGCAGTGGCTGTGCCTACGAAGCTGTTCAAAGAGCACCAATCCTT
CCCATATAACAAAAATGGATTCAAAGTGGGCATGAAGCTAGAAGGCGTGGACCCTGACCACCAGGCAATG
TACTGCGTCCTTACTGTGGCTGAGGTTTGTGGATATAGGATAAAACTTCACTTTGACGGTTATTCTGATT
GCTATGACTTCTGGGTAAATGCAGATGCTCTGGACATTCACCCAGTAGGCTGGTGTGAGAAGACTGGCCA
TAAGCTCCGCCCTCCAAAAGGGTATAAAGAAGAAGAATTTAATTGGCAGTCCTACCTTAAGACTTGCAAA
GCCCAGGCTGCTCCCAAGTCATTATTTGAAAATCAGAACATAACAGTGATCCCGTCAGGCTTTCGAGTTG
GGATGAAGCTCGAGGCTGCAGACAAAAAGAGCCCTTCTGTCATCTGTGTTGCTACGGTAACAGATATGGT
GGACAATCGTTTCCTGGTACATTTTGACAACTGGGATGAGAGCTATGACTATTGGTGTGAATCAAACAGT
CCACACATTCATCCAGTCGGCTGGTGTAAAGAGCACAGAAGAACCCTGATTACTCCACCAGGCTATTCTC
ATGTGAAACACTTTTCCTGGGATAAATATTTAGAAGAAACCAATTCTTTACCTGCTCCTGCAAGAGCTTT
CAAAGTGAAACCTCCACATGGATTCCAGAAGAAAATGAAGCTGGAAGCTGTGGACAAAAGAAACCCGCTG
TTCATCAGAGTAGCAACTGTAGCCGACACGGATGACCACCGGATAAAGGTTCACTTTGATGGCTGGAGCA
GTTGCTATGACTACTGGATTGATGCAGACTCTCCAGATATTCACCCCGTGGGCTGGTGTTCCAAGACCGG
GCACCCTCTTCAGGCTCCGCTAAGCCCTGCAGAATTAATGGAACCATCAGAAACCGGAGGATGTCCAACT
CTAGGCTGCAGGGGTGTTGGTCATTTTAAAAAATCGAGATACCTGGGCACTCAGAGTGGTGCCAACTGTC
CCTATTCAGAAATCAACCTGAGTAAGGAACGCATCTTCCCAGACCGCCTAAGTGGTGACACCTCTCCACC
TACTACTCCCTCGTTCCCAAGGAGTAAAAGGATGGACACCAGAGAAAGTTCCTCGTCTCCTGAAACCAGG
GAAAAGCATGCCAATAACTTCAAAGAAGATTCTGAAAAGAAAAAAGAAAATGAAGTAAAGACATCAGCCG
AAGCCAAAGTTGTTCGGGAAGAGCCTACCCCTAGTGTACAGCAGAGTCAGCCACCTCAGCAGGTGCAGCA
AGTGCAGCATGCTCAACCTCCTCAGCAGGCACAGAAGGCTCCGCAGGCCCAGCAGGCCCAGCAAGCCCAG
CAGGCCCAGCAGGCTCCACAGGCCCCACAGACTCCACAGCCCCAGCAGGCGCCACAGGTCCAGCAGGCCC
AGCAGGCTCCACAGGCTCAGCAGGCCCAGCAGCCCCAGCAGGCCCAGCAGCCTCAGCAGGCCCCACCCGT
CCAACAGCCTCAGCAGGTTCAACAGGCTCAGCCCACCCAGCAGCAAGCCCAGACCCAGCAGCAGGCCCAG
CGACGCTCAGCAGTATTTCTCTCCTTTAAGCCTCCCATTCCGTGTCTGCCCTTGCGCTGGGAGCAGCAGA
GCAAGCTTCTTCCGACTGTCGCTGGTATCCCAGCTAGTAGAGTTTCCAAATGGAGCACAGACGAGGTGTC
AGAATTCATTCAGAGCTTGCCTGGGTGTGAAGAACATGGAAAGGTGTTTAAGGATGAACAAATTGATGGA
GAAGCATTTTTACTCATGACCCAAACAGACATTGTTAAAATCATGAGCATTAAGCTGGGCCCAGCTCTCA
AAATTTTCAACTCTATTCTGATGTTCAAAGCTGCGGAGAAGAATTCCCACAATGAACTGTGA

Translation (883 aa):
MTESASSTSGQEFDVFSVMDWKDGVGTLPGSDLKFRVNEFGALEVITDESEMESVKKATATTTWMVPTAQ
DAPTSPPSSRPVFPPAYWTSPPGCPTVFSEKTGVPFRLKEQSKADGLQFCENCCQYGNGDECLSGGKYCS
QNCARHAKDKDQKDERDGGEDNDEEDPKCSRKKKPKLSLKADSKDDGEERDDEMENKQDGRILRGSQRAR
RKRRGDSAVLKQGLPPKGKKTWCWASYLEEEKAVAVPTKLFKEHQSFPYNKNGFKVGMKLEGVDPDHQAM
YCVLTVAEVCGYRIKLHFDGYSDCYDFWVNADALDIHPVGWCEKTGHKLRPPKGYKEEEFNWQSYLKTCK
AQAAPKSLFENQNITVIPSGFRVGMKLEAADKKSPSVICVATVTDMVDNRFLVHFDNWDESYDYWCESNS
PHIHPVGWCKEHRRTLITPPGYSHVKHFSWDKYLEETNSLPAPARAFKVKPPHGFQKKMKLEAVDKRNPL
FIRVATVADTDDHRIKVHFDGWSSCYDYWIDADSPDIHPVGWCSKTGHPLQAPLSPAELMEPSETGGCPT
LGCRGVGHFKKSRYLGTQSGANCPYSEINLSKERIFPDRLSGDTSPPTTPSFPRSKRMDTRESSSSPETR
EKHANNFKEDSEKKKENEVKTSAEAKVVREEPTPSVQQSQPPQQVQQVQHAQPPQQAQKAPQAQQAQQAQ
QAQQAPQAPQTPQPQQAPQVQQAQQAPQAQQAQQPQQAQQPQQAPPVQQPQQVQQAQPTQQQAQTQQQAQ
RRSAVFLSFKPPIPCLPLRWEQQSKLLPTVAGIPASRVSKWSTDEVSEFIQSLPGCEEHGKVFKDEQIDG
EAFLLMTQTDIVKIMSIKLGPALKIFNSILMFKAAEKNSHNEL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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