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Report for CCDS23621.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
23621.1 Public Mus musculus 9 Ccr8 23 108 98 CCDS HistoryNCBI Gene:12776Re-query CCDS DB by CCDS ID:23621.1Re-query CCDS DB by GeneID:12776See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 23621.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000048777.3 ENSMUSP00000038473.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000048777.3Link to Ensembl Protein Viewer:ENSMUSP00000038473.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000048777Re-query CCDS DB by Protein ID:ENSMUSP00000038473
Original member Current member NCBI NM_007720.2 NP_031746.1 Accepted alive Link to Nucleotide Sequence:NM_007720.2Link to Protein Sequence:NP_031746.1Re-query CCDS DB by Nucleotide ID:NM_007720Re-query CCDS DB by Protein ID:NP_031746Link to BLAST:NP_031746.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_031746.1 353 P56484 353 100% 0 0

Chromosomal Locations for CCDS 23621.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 9 (NC_000075.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 120093821 120094882 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1062 nt):
ATGGATTACACGATGGAGCCCAACGTCACGATGACCGACTACTACCCTGATTTCTTCACCGCCCCCTGTG
ACGCAGAGTTCCTCCTCAGGGGCAGCATGCTGTATCTGGCCATCTTGTACTGCGTCTTGTTTGTGCTGGG
CCTTCTGGGGAACAGCCTGGTCATCTTAGTCCTCGTGGGCTGCAAGAAACTGAGGAGCATCACAGATATC
TACCTCCTGAACCTGGCCGCATCCGACCTGCTCTTTGTCCTCTCTATTCCTTTTCAGACCCACAACCTGC
TGGACCAGTGGGTGTTTGGGACTGCGATGTGTAAGGTGGTCTCTGGCCTTTATTACATTGGTTTTTTCAG
CAGTATGTTCTTCATCACCCTAATGAGTGTGGACAGGTATCTGGCTATTGTCCACGCTGTCTATGCCATC
AAGGTGAGGACGGCCAGCGTGGGCACAGCCCTGAGTCTGACAGTGTGGCTGGCTGCTGTCACAGCCACCA
TCCCCTTGATGGTTTTTTACCAAGTGGCCTCTGAAGACGGCATGCTACAATGTTTCCAGTTTTATGAAGA
GCAGTCTTTGAGGTGGAAGCTCTTTACCCACTTTGAAATCAACGCCTTGGGTCTGCTGCTCCCCTTTGCC
ATCCTCCTGTTCTGCTATGTCAGGATCCTGCAGCAGCTGCGGGGCTGCCTGAACCACAACAGGACCAGAG
CCATCAAGCTGGTGCTCACCGTAGTCATTGTGTCTTTACTCTTCTGGGTCCCATTCAACGTGGCCCTTTT
CCTCACGTCCCTGCACGACCTGCACATCTTGGATGGATGTGCCACGAGGCAGAGGCTGGCTCTGGCCATC
CATGTCACAGAGGTCATCTCTTTTACCCACTGCTGCGTGAACCCCGTCATCTACGCGTTCATAGGAGAGA
AGTTTAAGAAACACCTCATGGATGTGTTTCAAAAGAGCTGCAGCCACATCTTCCTCTACTTAGGGAGACA
AATGCCCGTGGGGGCGTTGGAAAGGCAGCTGTCCTCGAACCAGCGATCTTCCCATTCTTCCACCCTGGAT
GACATCTTGTAA

Translation (353 aa):
MDYTMEPNVTMTDYYPDFFTAPCDAEFLLRGSMLYLAILYCVLFVLGLLGNSLVILVLVGCKKLRSITDI
YLLNLAASDLLFVLSIPFQTHNLLDQWVFGTAMCKVVSGLYYIGFFSSMFFITLMSVDRYLAIVHAVYAI
KVRTASVGTALSLTVWLAAVTATIPLMVFYQVASEDGMLQCFQFYEEQSLRWKLFTHFEINALGLLLPFA
ILLFCYVRILQQLRGCLNHNRTRAIKLVLTVVIVSLLFWVPFNVALFLTSLHDLHILDGCATRQRLALAI
HVTEVISFTHCCVNPVIYAFIGEKFKKHLMDVFQKSCSHIFLYLGRQMPVGALERQLSSNQRSSHSSTLD
DIL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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