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Report for CCDS22619.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
22619.1 Public Mus musculus 8 Pskh1 23 108 98 CCDS HistoryNCBI Gene:244631Re-query CCDS DB by CCDS ID:22619.1Re-query CCDS DB by GeneID:244631See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 22619.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000049699.8 ENSMUSP00000061700.8 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000049699.8Link to Ensembl Protein Viewer:ENSMUSP00000061700.8Re-query CCDS DB by Nucleotide ID:ENSMUST00000049699Re-query CCDS DB by Protein ID:ENSMUSP00000061700
Original member Current member NCBI NM_173432.2 NP_775608.1 Accepted alive Link to Nucleotide Sequence:NM_173432.2Link to Protein Sequence:NP_775608.1Re-query CCDS DB by Nucleotide ID:NM_173432Re-query CCDS DB by Protein ID:NP_775608Link to BLAST:NP_775608.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_775608.1 424 Q91YA2 424 100% 0 0

Chromosomal Locations for CCDS 22619.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 8 (NC_000074.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 105912690 105913646 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 105929651 105929968 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1275 nt):
ATGGGCTGTGGGACAAGCAAGGTCCTTCCTGAGCCACCCAAGGATGTCCAGCTGGATCTGGTCAAGAAAG
TGGAGCCCTTCAGTGGCACTAAGAATGATGTATACAAGCACTTCATCACAGAGGTGGACAGTGTTGGCCC
TCTCAAAGCTGGCTTCCCAGCTACTAGTCAGTATGCACCTCCCTGCCCTGGTGTTCCCAATACTGGCCAC
ACAGCGCCTCCTTCAGAACCACCACGAAGGGCCAGGGTGGCAAAGTACAGGGCCAAATTTGACCCACGAG
TGACAGCTAAGTATGATATAAAGGCCCTAATTGGGCGAGGCAGCTTTAGCCGAGTGGTACGTGTGGAGCA
CCGGGCAACCCGACAGCCATATGCTATCAAGATGATAGAGACCAAGTACCGAGAAGGGCGGGAGGTGTGT
GAGTCCGAGCTCCGAGTGCTGCGCCGGGTGCGCCACGCCAACATCATCCAGCTGGTAGAAGTGTTTGAGA
CACAGGAGCGTGTATATATGGTGATGGAGCTGGCCACTGGCGGTGAGCTCTTTGACCGGATTATTGCCAA
GGGTTCTTTCACTGAACGAGATGCCACAAGAGTGCTTCAAATGGTACTGGATGGTGTCCGGTATCTTCAT
GCCCTTGGCATTACACACCGAGACCTCAAGCCTGAGAATCTCCTTTACTACCACCCAGGCACTGACTCCA
AGATCATCATCACTGACTTTGGCTTGGCCAGTGCCCGGAAGAAAGGTGACGACTGCCTGATGAAGACCAC
GTGCGGCACACCTGAGTACATTGCTCCTGAGGTTCTGGTGCGAAAACCCTACACCAATTCCGTGGATATG
TGGGCACTGGGTGTCATTGCCTACATCCTGCTCAGCGGCACCATGCCCTTTGAGGATGACAACCGCACCC
GGCTATACCGGCAGATCCTCAGGGGCAAATACAGTTATCTGGGGGAGCCCTGGCCTAGTGTATCTAATCT
GGCCAAGGACTTCATTGACCGCCTGCTGACCGTGGACCCTGGAGCCCGGATGACTGCACTGCAGGCCCTA
AGACACCCATGGGTAGTAAGCATGGCAGCCTCTTCATCCATGAAGAATCTGCACCGATCCATCTCCCAGA
ATCTCCTCAAGCGGGCTTCCTCTCGTTGCCAGAGCACCAAGTCTTCCCAGTCCACGCGTTCCAGCCGCTC
CACTCGTTCCAACAAGTCACGCCGTGTTCGGGAGCGCGAACTGCGGGAGCTTAACCTGCGCTATCAACAG
CAGTATAACGGCTGA

Translation (424 aa):
MGCGTSKVLPEPPKDVQLDLVKKVEPFSGTKNDVYKHFITEVDSVGPLKAGFPATSQYAPPCPGVPNTGH
TAPPSEPPRRARVAKYRAKFDPRVTAKYDIKALIGRGSFSRVVRVEHRATRQPYAIKMIETKYREGREVC
ESELRVLRRVRHANIIQLVEVFETQERVYMVMELATGGELFDRIIAKGSFTERDATRVLQMVLDGVRYLH
ALGITHRDLKPENLLYYHPGTDSKIIITDFGLASARKKGDDCLMKTTCGTPEYIAPEVLVRKPYTNSVDM
WALGVIAYILLSGTMPFEDDNRTRLYRQILRGKYSYLGEPWPSVSNLAKDFIDRLLTVDPGARMTALQAL
RHPWVVSMAASSSMKNLHRSISQNLLKRASSRCQSTKSSQSTRSSRSTRSNKSRRVRERELRELNLRYQQ
QYNG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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