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Report for CCDS2211.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
2211.1 Public Homo sapiens 2 LY75 24 110 108 CCDS HistoryNCBI Gene:4065Re-query CCDS DB by CCDS ID:2211.1Re-query CCDS DB by GeneID:4065See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 2211.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000263636.5 ENSP00000263636.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000263636.5Link to Ensembl Protein Viewer:ENSP00000263636.4Re-query CCDS DB by Nucleotide ID:ENST00000263636Re-query CCDS DB by Protein ID:ENSP00000263636
Original member Current member NCBI NM_002349.4 NP_002340.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_002349.4Link to Protein Sequence:NP_002340.2Re-query CCDS DB by Nucleotide ID:NM_002349Re-query CCDS DB by Protein ID:NP_002340Link to BLAST:NP_002340.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_002340.2 1722 O60449-1 1722 100% 0 0

Chromosomal Locations for CCDS 2211.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 159805044 159805222 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 159806973 159807140 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 159808449 159808571 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 159810526 159810675 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 159815405 159815573 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 159816806 159817032 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 159819726 159819920 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 159831670 159831786 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 159834044 159834211 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 159835480 159835645 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 159840729 159840955 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 159842245 159842374 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 159849980 159850140 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 159850362 159850467 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 159852201 159852340 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 159853273 159853352 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 159853630 159853697 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 159854360 159854535 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 159854904 159854939 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 159858362 159858476 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 159860821 159860889 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 159864839 159864920 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 159872451 159872593 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 159875444 159875643 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 159878324 159878493 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 159878633 159878721 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 159879259 159879369 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 159881083 159881240 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 159882124 159882315 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 159885153 159885293 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 159886420 159886530 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 159890213 159890377 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 159893914 159894084 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 159898688 159899059 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 159904589 159904682 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (5169 nt):
ATGAGGACAGGCTGGGCGACCCCTCGCCGCCCGGCGGGGCTCCTCATGCTGCTCTTCTGGTTCTTCGATC
TCGCGGAGCCCTCTGGCCGCGCAGCTAATGACCCCTTCACCATCGTCCATGGAAATACGGGCAAGTGCAT
CAAGCCAGTGTATGGCTGGATAGTAGCAGACGACTGTGATGAAACTGAGGACAAGTTATGGAAGTGGGTG
TCCCAGCATCGGCTCTTTCATTTGCACTCCCAAAAGTGCCTTGGCCTCGATATTACCAAATCGGTAAATG
AGCTGAGAATGTTCAGCTGTGACTCCAGTGCCATGCTGTGGTGGAAATGTGAGCACCACTCTCTGTACGG
AGCTGCCCGGTACCGGCTGGCTCTGAAGGATGGACATGGCACAGCAATCTCAAATGCATCTGATGTCTGG
AAGAAAGGAGGCTCAGAGGAAAGCCTTTGTGACCAGCCTTATCATGAGATCTATACCAGAGATGGGAACT
CTTATGGGAGACCTTGTGAATTTCCATTCTTAATTGATGGGACCTGGCATCATGATTGCATTCTTGATGA
AGATCATAGTGGGCCATGGTGTGCCACCACCTTAAATTATGAATATGACCGAAAGTGGGGCATCTGCTTA
AAGCCTGAAAACGGTTGTGAAGATAATTGGGAAAAGAACGAGCAGTTTGGAAGTTGCTACCAATTTAATA
CTCAGACGGCTCTTTCTTGGAAAGAAGCTTATGTTTCATGTCAGAATCAAGGAGCTGATTTACTGAGCAT
CAACAGTGCTGCTGAATTAACTTACCTTAAAGAAAAAGAAGGCATTGCTAAGATTTTCTGGATTGGTTTA
AATCAGCTATACTCTGCTAGAGGCTGGGAATGGTCAGACCACAAACCATTAAACTTTCTCAACTGGGATC
CAGACAGGCCCAGTGCACCTACTATAGGTGGCTCCAGCTGTGCAAGAATGGATGCTGAGTCTGGTCTGTG
GCAGAGCTTTTCCTGTGAAGCTCAACTGCCCTATGTCTGCAGGAAACCATTAAATAATACAGTGGAGTTA
ACAGATGTCTGGACATACTCAGATACCCGCTGTGATGCAGGCTGGCTGCCAAATAATGGATTTTGCTATC
TGCTGGTAAATGAAAGTAATTCCTGGGATAAGGCACATGCGAAATGCAAAGCCTTCAGTAGTGACCTAAT
CAGCATTCATTCTCTAGCAGATGTGGAGGTGGTTGTCACAAAACTCCATAATGAGGATATCAAAGAAGAA
GTGTGGATAGGCCTTAAGAACATAAACATACCAACTTTATTTCAGTGGTCAGATGGTACTGAAGTTACTC
TAACATATTGGGATGAGAATGAGCCAAATGTTCCCTACAATAAGACGCCCAACTGTGTTTCCTACTTAGG
AGAGCTAGGTCAGTGGAAAGTCCAATCATGTGAGGAGAAACTAAAATATGTATGCAAGAGAAAGGGAGAA
AAACTGAATGACGCAAGTTCTGATAAGATGTGTCCTCCAGATGAGGGCTGGAAGAGACATGGAGAAACCT
GTTACAAGATTTATGAGGATGAGGTCCCTTTTGGAACAAACTGCAATCTGACTATCACTAGCAGATTTGA
GCAAGAATACCTAAATGATTTGATGAAAAAGTATGATAAATCTCTAAGAAAATACTTCTGGACTGGCCTG
AGAGATGTAGATTCTTGTGGAGAGTATAACTGGGCAACTGTTGGTGGAAGAAGGCGGGCTGTAACCTTTT
CCAACTGGAATTTTCTTGAGCCAGCTTCCCCGGGCGGCTGCGTGGCTATGTCTACTGGAAAGTCTGTTGG
AAAGTGGGAGGTGAAGGACTGCAGAAGCTTCAAAGCACTTTCAATTTGCAAGAAAATGAGTGGACCCCTT
GGGCCTGAAGAAGCATCCCCTAAGCCTGATGACCCCTGTCCTGAAGGCTGGCAGAGTTTCCCCGCAAGTC
TTTCTTGTTATAAGGTATTCCATGCAGAAAGAATTGTAAGAAAGAGGAACTGGGAAGAAGCTGAACGATT
CTGCCAAGCCCTTGGAGCACACCTTTCTAGCTTCAGCCATGTGGATGAAATAAAGGAATTTCTTCACTTT
TTAACGGACCAGTTCAGTGGCCAGCATTGGCTGTGGATTGGTTTGAATAAAAGGAGCCCAGATTTACAAG
GATCCTGGCAATGGAGTGATCGTACACCAGTGTCTACTATTATCATGCCAAATGAGTTTCAGCAGGATTA
TGACATCAGAGACTGTGCTGCTGTCAAGGTATTTCATAGGCCATGGCGAAGAGGCTGGCATTTCTATGAT
GATAGAGAATTTATTTATTTGAGGCCTTTTGCTTGTGATACAAAACTTGAATGGGTGTGCCAAATTCCAA
AAGGCCGTACTCCAAAAACACCAGACTGGTACAATCCAGACCGTGCTGGAATTCATGGACCTCCACTTAT
AATTGAAGGAAGTGAATATTGGTTTGTTGCTGATCTTCACCTAAACTATGAAGAAGCCGTCCTGTACTGT
GCCAGCAATCACAGCTTTCTTGCAACTATAACATCTTTTGTGGGACTAAAAGCCATCAAAAACAAAATAG
CAAATATATCTGGTGATGGACAGAAGTGGTGGATAAGAATTAGCGAGTGGCCAATAGATGATCATTTTAC
ATACTCACGATATCCATGGCACCGCTTTCCTGTGACATTTGGAGAGGAATGCTTGTACATGTCTGCCAAG
ACTTGGCTTATCGACTTAGGTAAACCAACAGACTGTAGTACCAAGTTGCCCTTCATCTGTGAAAAATATA
ATGTTTCTTCGTTAGAGAAATACAGCCCAGATTCTGCAGCTAAAGTGCAATGTTCTGAGCAATGGATTCC
TTTTCAGAATAAGTGTTTTCTAAAGATCAAACCCGTGTCTCTCACATTTTCTCAAGCAAGCGATACCTGT
CACTCCTATGGTGGCACCCTTCCTTCAGTGTTGAGCCAGATTGAACAAGACTTTATTACATCCTTGCTTC
CGGATATGGAAGCTACTTTATGGATTGGTTTGCGCTGGACTGCCTATGAAAAGATAAACAAATGGACAGA
TAACAGAGAGCTGACGTACAGTAACTTTCACCCATTATTGGTTAGTGGGAGGCTGAGAATACCAGAAAAT
TTTTTTGAGGAAGAGTCTCGCTACCACTGTGCCCTAATACTCAACCTCCAAAAATCACCGTTTACTGGGA
CGTGGAATTTTACATCCTGCAGTGAACGCCACTTTGTGTCTCTCTGTCAGAAATATTCAGAAGTTAAAAG
CAGACAGACGTTGCAGAATGCTTCAGAAACTGTAAAGTATCTAAATAATCTGTACAAAATAATCCCAAAG
ACTCTGACTTGGCACAGTGCTAAAAGGGAGTGTCTGAAAAGTAACATGCAGCTGGTGAGCATCACGGACC
CTTACCAGCAGGCATTCCTCAGTGTGCAGGCGCTCCTTCACAACTCTTCCTTATGGATCGGACTCTTCAG
TCAAGATGATGAACTCAACTTTGGTTGGTCAGATGGGAAACGTCTTCATTTTAGTCGCTGGGCTGAAACT
AATGGGCAACTCGAAGACTGTGTAGTATTAGACACTGATGGATTCTGGAAAACAGTTGATTGCAATGACA
ATCAACCAGGTGCTATTTGCTACTATTCAGGAAATGAGACTGAAAAAGAGGTCAAACCAGTTGACAGTGT
TAAATGTCCATCTCCTGTTCTAAATACTCCGTGGATACCATTTCAGAACTGTTGCTACAATTTCATAATA
ACAAAGAATAGGCATATGGCAACAACACAGGATGAAGTTCATACTAAATGCCAGAAACTGAATCCAAAAT
CACATATTCTGAGTATTCGAGATGAAAAGGAGAATAACTTTGTTCTTGAGCAACTGCTGTACTTCAATTA
TATGGCTTCATGGGTCATGTTAGGAATAACTTATAGAAATAAGTCTCTTATGTGGTTTGATAAGACCCCA
CTGTCATATACACATTGGAGAGCAGGAAGACCAACTATAAAAAATGAGAAGTTTTTGGCTGGTTTAAGTA
CTGACGGCTTCTGGGATATTCAAACCTTTAAAGTTATTGAAGAAGCAGTTTATTTTCACCAGCACAGCAT
TCTTGCTTGTAAAATTGAAATGGTTGACTACAAAGAAGAATATAATACTACACTGCCACAGTTTATGCCA
TATGAAGATGGTATTTACAGTGTTATTCAAAAAAAGGTAACATGGTATGAAGCATTAAACATGTGTTCTC
AAAGTGGAGGTCACTTGGCAAGCGTTCACAACCAAAATGGCCAGCTCTTTCTGGAAGATATTGTAAAACG
TGATGGATTTCCACTATGGGTTGGGCTCTCAAGTCATGATGGAAGTGAATCAAGTTTTGAATGGTCTGAT
GGTAGTACATTTGACTATATCCCATGGAAAGGCCAAACATCTCCTGGAAATTGTGTTCTCTTGGATCCAA
AAGGAACTTGGAAACATGAAAAATGCAACTCTGTTAAGGATGGTGCTATTTGTTATAAACCTACAAAATC
TAAAAAGCTGTCCCGTCTTACATATTCATCAAGATGTCCAGCAGCAAAAGAGAATGGGTCACGGTGGATC
CAGTACAAGGGTCACTGTTACAAGTCTGATCAGGCATTGCACAGTTTTTCAGAGGCCAAAAAATTGTGTT
CAAAACATGATCACTCTGCAACTATCGTTTCCATAAAAGATGAAGATGAGAATAAATTTGTGAGCAGACT
GATGAGGGAAAATAATAACATTACCATGAGAGTTTGGCTTGGATTATCTCAACATTCTGTTGACCAGTCT
TGGAGTTGGTTAGATGGATCAGAAGTGACATTTGTCAAATGGGAAAATAAAAGTAAGAGTGGTGTTGGAA
GATGTAGCATGTTGATAGCTTCAAATGAAACTTGGAAAAAAGTTGAATGTGAACATGGTTTTGGAAGAGT
TGTCTGCAAAGTGCCTCTGGGCCCTGATTACACAGCAATAGCTATCATAGTTGCCACACTAAGTATCTTA
GTTCTCATGGGCGGACTGATTTGGTTCCTCTTCCAAAGGCACCGTTTGCACCTGGCGGGTTTCTCATCAG
TTCGATATGCACAAGGAGTGAATGAAGATGAGATTATGCTTCCTTCTTTCCATGACTAA

Translation (1722 aa):
MRTGWATPRRPAGLLMLLFWFFDLAEPSGRAANDPFTIVHGNTGKCIKPVYGWIVADDCDETEDKLWKWV
SQHRLFHLHSQKCLGLDITKSVNELRMFSCDSSAMLWWKCEHHSLYGAARYRLALKDGHGTAISNASDVW
KKGGSEESLCDQPYHEIYTRDGNSYGRPCEFPFLIDGTWHHDCILDEDHSGPWCATTLNYEYDRKWGICL
KPENGCEDNWEKNEQFGSCYQFNTQTALSWKEAYVSCQNQGADLLSINSAAELTYLKEKEGIAKIFWIGL
NQLYSARGWEWSDHKPLNFLNWDPDRPSAPTIGGSSCARMDAESGLWQSFSCEAQLPYVCRKPLNNTVEL
TDVWTYSDTRCDAGWLPNNGFCYLLVNESNSWDKAHAKCKAFSSDLISIHSLADVEVVVTKLHNEDIKEE
VWIGLKNINIPTLFQWSDGTEVTLTYWDENEPNVPYNKTPNCVSYLGELGQWKVQSCEEKLKYVCKRKGE
KLNDASSDKMCPPDEGWKRHGETCYKIYEDEVPFGTNCNLTITSRFEQEYLNDLMKKYDKSLRKYFWTGL
RDVDSCGEYNWATVGGRRRAVTFSNWNFLEPASPGGCVAMSTGKSVGKWEVKDCRSFKALSICKKMSGPL
GPEEASPKPDDPCPEGWQSFPASLSCYKVFHAERIVRKRNWEEAERFCQALGAHLSSFSHVDEIKEFLHF
LTDQFSGQHWLWIGLNKRSPDLQGSWQWSDRTPVSTIIMPNEFQQDYDIRDCAAVKVFHRPWRRGWHFYD
DREFIYLRPFACDTKLEWVCQIPKGRTPKTPDWYNPDRAGIHGPPLIIEGSEYWFVADLHLNYEEAVLYC
ASNHSFLATITSFVGLKAIKNKIANISGDGQKWWIRISEWPIDDHFTYSRYPWHRFPVTFGEECLYMSAK
TWLIDLGKPTDCSTKLPFICEKYNVSSLEKYSPDSAAKVQCSEQWIPFQNKCFLKIKPVSLTFSQASDTC
HSYGGTLPSVLSQIEQDFITSLLPDMEATLWIGLRWTAYEKINKWTDNRELTYSNFHPLLVSGRLRIPEN
FFEEESRYHCALILNLQKSPFTGTWNFTSCSERHFVSLCQKYSEVKSRQTLQNASETVKYLNNLYKIIPK
TLTWHSAKRECLKSNMQLVSITDPYQQAFLSVQALLHNSSLWIGLFSQDDELNFGWSDGKRLHFSRWAET
NGQLEDCVVLDTDGFWKTVDCNDNQPGAICYYSGNETEKEVKPVDSVKCPSPVLNTPWIPFQNCCYNFII
TKNRHMATTQDEVHTKCQKLNPKSHILSIRDEKENNFVLEQLLYFNYMASWVMLGITYRNKSLMWFDKTP
LSYTHWRAGRPTIKNEKFLAGLSTDGFWDIQTFKVIEEAVYFHQHSILACKIEMVDYKEEYNTTLPQFMP
YEDGIYSVIQKKVTWYEALNMCSQSGGHLASVHNQNGQLFLEDIVKRDGFPLWVGLSSHDGSESSFEWSD
GSTFDYIPWKGQTSPGNCVLLDPKGTWKHEKCNSVKDGAICYKPTKSKKLSRLTYSSRCPAAKENGSRWI
QYKGHCYKSDQALHSFSEAKKLCSKHDHSATIVSIKDEDENKFVSRLMRENNNITMRVWLGLSQHSVDQS
WSWLDGSEVTFVKWENKSKSGVGRCSMLIASNETWKKVECEHGFGRVVCKVPLGPDYTAIAIIVATLSIL
VLMGGLIWFLFQRHRLHLAGFSSVRYAQGVNEDEIMLPSFHD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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