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Report for CCDS21885.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
21885.1 Public Mus musculus 7 Kat8 23 108 98 CCDS HistoryNCBI Gene:67773Re-query CCDS DB by CCDS ID:21885.1Re-query CCDS DB by GeneID:67773See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 21885.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000033070.8 ENSMUSP00000033070.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000033070.8Link to Ensembl Protein Viewer:ENSMUSP00000033070.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000033070Re-query CCDS DB by Protein ID:ENSMUSP00000033070
Original member Current member NCBI NM_026370.2 NP_080646.1 Accepted alive Link to Nucleotide Sequence:NM_026370.2Link to Protein Sequence:NP_080646.1Re-query CCDS DB by Nucleotide ID:NM_026370Re-query CCDS DB by Protein ID:NP_080646Link to BLAST:NP_080646.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_080646.1 458 Q9D1P2-1 458 100% 0 0

Chromosomal Locations for CCDS 21885.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 127912532 127912742 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 127915228 127915302 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 127915379 127915554 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 127920236 127920289 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 127920422 127920586 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 127922159 127922248 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 127924378 127924518 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 127924604 127924697 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 127924796 127924946 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 127925109 127925263 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 127925587 127925651 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1377 nt):
ATGGCGGCACAGGGAGCTACAGCTGCAGTTGCTGCAACAACTTCAGGAACTGTAGGGGAGGGAGAGCCCG
GCCCGGGGGAAAATGCAGCAGTCGAGGGGCCTGCCCGGTCCCCGGGCCGGGTCTCTCCGCCGACTCCGGC
GCGTGGCGAACCAGAAGTCACCGTGGAGATCGGAGAAACGTACCTGTGCCGGCGGCCGGATAGCACCTGG
CATTCAGCAGAAGTGATCCAGTCTCGAGTGAATGACCAGGAAGGCCGAGAAGAATTCTATGTTCACTATG
TGGGCTTTAACAGGCGACTGGACGAATGGGTGGACAAGAACCGACTCGCACTGACCAAGACAGTGAAGGA
TGCCGTGCAGAAGAACTCTGAGAAATACCTGAGTGAGCTGGCCGAGCAGCCAGAGCGCAAGATCACTCGA
AACCAAAAGCGAAAGCATGATGAGATCAACCATGTGCAGAAGACCTATGCAGAGATGGACCCCACCACAG
CAGCCTTGGAAAAGGAACACGAGGCGATCACCAAAGTGAAGTATGTAGACAAGATCCACATTGGGAACTA
TGAAATCGATGCCTGGTATTTCTCACCTTTCCCAGAGGACTATGGGAAGCAGCCCAAGCTTTGGCTCTGC
GAGTACTGCCTCAAATACATGAAGTTCGAGAAGAGCTACCGCTTCCACCTGGGCCAGTGTCAGTGGCGGC
AGCCCCCAGGGAAGGAGATCTATCGAAAGAGCAACATCTCTGTGTATGAAGTGGATGGCAAAGACCACAA
GATATACTGTCAGAACCTGTGTCTACTGGCCAAGCTTTTCCTGGACCACAAGACCTTGTATTTTGATGTG
GAGCCCTTTGTCTTTTACATTCTGACAGAAGTAGATAGGCAAGGGGCTCACATTGTTGGCTACTTTTCTA
AGGAGAAGGAATCCCCAGATGGAAACAACGTGGCCTGCATCTTGACCCTGCCTCCCTACCAGCGGCGTGG
CTATGGGAAGTTTCTCATCGCCTTCAGTTATGAGCTCTCTAAGCTCGAGAGTACTGTAGGCTCCCCAGAG
AAGCCACTGAGTGACCTGGGCAAACTCAGCTACAGAAGCTACTGGTCATGGGTCTTGCTGGAGATCCTGC
GAGACTTCCGGGGCACATTGTCTATCAAAGATCTTAGCCAGATGACCAGCATCACCCAGAATGACATCAT
CAGCACCCTGCAGTCCCTCAACATGGTCAAGTACTGGAAGGGCCAGCATGTTATCTGTGTCACACCTAAG
CTGGTAGAGGAACACCTCAAAAGTGCCCAGTATAAGAAACCACCTATCACAGTGGACTCTGTCTGCCTCA
AGTGGGCACCCCCGAAGCACAAACAAGTCAAGCTTTCCAAGAAGTGA

Translation (458 aa):
MAAQGATAAVAATTSGTVGEGEPGPGENAAVEGPARSPGRVSPPTPARGEPEVTVEIGETYLCRRPDSTW
HSAEVIQSRVNDQEGREEFYVHYVGFNRRLDEWVDKNRLALTKTVKDAVQKNSEKYLSELAEQPERKITR
NQKRKHDEINHVQKTYAEMDPTTAALEKEHEAITKVKYVDKIHIGNYEIDAWYFSPFPEDYGKQPKLWLC
EYCLKYMKFEKSYRFHLGQCQWRQPPGKEIYRKSNISVYEVDGKDHKIYCQNLCLLAKLFLDHKTLYFDV
EPFVFYILTEVDRQGAHIVGYFSKEKESPDGNNVACILTLPPYQRRGYGKFLIAFSYELSKLESTVGSPE
KPLSDLGKLSYRSYWSWVLLEILRDFRGTLSIKDLSQMTSITQNDIISTLQSLNMVKYWKGQHVICVTPK
LVEEHLKSAQYKKPPITVDSVCLKWAPPKHKQVKLSKK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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