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Report for CCDS21792.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
21792.1 Public Mus musculus 7 Zp2 23 108 98 CCDS HistoryNCBI Gene:22787Re-query CCDS DB by CCDS ID:21792.1Re-query CCDS DB by GeneID:22787See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 21792.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000033207.5 ENSMUSP00000033207.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000033207.5Link to Ensembl Protein Viewer:ENSMUSP00000033207.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000033207Re-query CCDS DB by Protein ID:ENSMUSP00000033207
Original member Current member NCBI NM_011775.7 NP_035905.1 Accepted alive Link to Nucleotide Sequence:NM_011775.7Link to Protein Sequence:NP_035905.1Re-query CCDS DB by Nucleotide ID:NM_011775Re-query CCDS DB by Protein ID:NP_035905Link to BLAST:NP_035905.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_035905.1 713 P20239 713 100% 0 0

Chromosomal Locations for CCDS 21792.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 120132389 120132546 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 120133338 120133415 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 120133730 120133826 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 120133908 120134043 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 120135152 120135341 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 120135481 120135605 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 120135703 120135794 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 120135883 120136064 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 120137135 120137261 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 120138007 120138191 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 120138289 120138385 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 120139688 120139849 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 120141227 120141271 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 120141832 120141981 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 120143590 120143684 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 120144042 120144125 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 120145032 120145120 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 120145211 120145260 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2142 nt):
ATGGCGAGGTGGCAGAGGAAAGCATCTGTAAGCTCTCCGTGCGGCAGGAGCATCTACAGGTTTCTTTCCC
TCTTATTCACCCTTGTGACTTCAGTGAACTCAGTAAGCCTTCCTCAGTCCGAGAATCCTGCCTTCCCAGG
CACTCTCATTTGTGACAAAGACGAAGTGAGAATTGAATTTTCAAGCAGATTTGACATGGAAAAATGGAAT
CCTTCTGTGGTGGATACCCTTGGTAGTGAAATTTTGAACTGCACTTATGCTCTGGACTTGGAAAGGTTCG
TCCTGAAGTTCCCTTACGAGACCTGCACTATAAAAGTGGTTGGTGGATACCAGGTGAACATCAGAGTGGG
GGACACCACCACTGATGTGAGATATAAAGATGACATGTATCATTTCTTCTGTCCAGCTATTCAAGCAGAG
ACCCATGAGATTTCAGAAATTGTTGTCTGCAGGAGAGATCTAATATCTTTTTCTTTCCCACAACTTTTCT
CTAGGCTTGCTGATGAAAACCAGAATGTATCTGAGATGGGATGGATTGTTAAGATTGGCAATGGTACAAG
AGCCCACATTCTGCCCTTGAAGGATGCCATAGTACAAGGATTTAATCTTCTGATTGACAGCCAGAAAGTA
ACTCTCCACGTGCCAGCCAATGCTACTGGAATAGTTCACTATGTGCAAGAGAGCAGCTATCTCTATACTG
TGCAGCTGGAGCTCTTGTTCTCAACCACTGGGCAGAAGATCGTCTTCTCATCACACGCTATCTGCGCACC
AGATCTTTCTGTGGCTTGTAATGCTACACACATGACTCTCACTATACCAGAATTTCCTGGGAAGCTAGAG
TCTGTGGACTTTGGACAATGGAGCATCCCTGAGGACCAATGGCATGCCAATGGAATTGACAAAGAAGCAA
CAAATGGCTTGAGATTGAATTTCAGAAAATCTCTCCTGAAAACTAAACCCTCTGAAAAATGTCCATTCTA
CCAGTTCTACCTCTCTTCACTCAAGCTGACCTTCTACTTCCAAGGGAACATGCTATCCACAGTGATAGAT
CCTGAGTGCCACTGTGAGTCACCAGTCTCTATAGATGAACTGTGTGCACAGGATGGGTTTATGGACTTTG
AGGTCTACAGCCACCAAACAAAACCCGCACTGAACCTGGACACCCTCCTGGTGGGAAATTCCTCTTGCCA
GCCTATTTTCAAGGTGCAGTCTGTGGGGCTTGCAAGGTTTCACATACCTCTGAATGGATGTGGAACAAGG
CAGAAATTTGAAGGTGATAAAGTCATCTATGAGAATGAAATACATGCTCTCTGGGAAAACCCACCCTCCA
ACATTGTATTCAGAAACAGCGAGTTCAGGATGACAGTAAGATGCTATTACATCAGAGACAGTATGCTACT
AAATGCCCATGTCAAAGGACATCCTTCTCCAGAGGCCTTTGTAAAGCCAGGCCCACTGGTGTTGGTCCTA
CAAACATACCCAGACCAATCCTACCAACGGCCTTACAGGAAGGATGAGTACCCTCTAGTGAGGTACCTCC
GCCAGCCAATCTACATGGAAGTGAAGGTCTTGAGCAGGAACGATCCCAACATCAAGCTGGTCTTAGATGA
CTGCTGGGCAACTTCTTCTGAGGACCCGGCCTCTGCGCCTCAGTGGCAGATTGTCATGGATGGCTGTGAA
TATGAACTGGACAACTACCGCACTACTTTCCACCCAGCTGGCTCCTCTGCAGCCCATTCCGGTCACTACC
AGAGGTTTGATGTGAAGACTTTTGCCTTTGTATCAGAGGCACGGGGGCTCTCCAGCCTGATCTACTTCCA
CTGCAGTGCCTTGATCTGTAACCAAGTCTCTCTTGACTCCCCTCTGTGCTCTGTGACTTGCCCTGCATCA
CTGAGGAGCAAACGAGAGGCCAACAAAGAAGACACAATGACGGTTAGCCTTCCAGGACCTATTCTCTTGC
TGTCAGATGTCTCTTCATCCAAAGGTGTTGACCCCAGCAGCTCTGAGATTACCAAGGATATTATTGCCAA
GGATATTGCTTCTAAAACATTGGGTGCTGTGGCTGCACTAGTGGGCTCAGCTGTCATTCTAGGCTTCATC
TGTTACCTGTATAAGAAAAGAACTATAAGGTTCAATCACTGA

Translation (713 aa):
MARWQRKASVSSPCGRSIYRFLSLLFTLVTSVNSVSLPQSENPAFPGTLICDKDEVRIEFSSRFDMEKWN
PSVVDTLGSEILNCTYALDLERFVLKFPYETCTIKVVGGYQVNIRVGDTTTDVRYKDDMYHFFCPAIQAE
THEISEIVVCRRDLISFSFPQLFSRLADENQNVSEMGWIVKIGNGTRAHILPLKDAIVQGFNLLIDSQKV
TLHVPANATGIVHYVQESSYLYTVQLELLFSTTGQKIVFSSHAICAPDLSVACNATHMTLTIPEFPGKLE
SVDFGQWSIPEDQWHANGIDKEATNGLRLNFRKSLLKTKPSEKCPFYQFYLSSLKLTFYFQGNMLSTVID
PECHCESPVSIDELCAQDGFMDFEVYSHQTKPALNLDTLLVGNSSCQPIFKVQSVGLARFHIPLNGCGTR
QKFEGDKVIYENEIHALWENPPSNIVFRNSEFRMTVRCYYIRDSMLLNAHVKGHPSPEAFVKPGPLVLVL
QTYPDQSYQRPYRKDEYPLVRYLRQPIYMEVKVLSRNDPNIKLVLDDCWATSSEDPASAPQWQIVMDGCE
YELDNYRTTFHPAGSSAAHSGHYQRFDVKTFAFVSEARGLSSLIYFHCSALICNQVSLDSPLCSVTCPAS
LRSKREANKEDTMTVSLPGPILLLSDVSSSKGVDPSSSEITKDIIAKDIASKTLGAVAALVGSAVILGFI
CYLYKKRTIRFNH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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