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Report for CCDS21737.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
21737.1 Public Mus musculus 7 Ascl3 23 108 98 CCDS HistoryNCBI Gene:56787Re-query CCDS DB by CCDS ID:21737.1Re-query CCDS DB by GeneID:56787See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 21737.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000035372.2 ENSMUSP00000037702.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000035372.2Link to Ensembl Protein Viewer:ENSMUSP00000037702.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000035372Re-query CCDS DB by Protein ID:ENSMUSP00000037702
Original member Current member NCBI NM_020051.1 NP_064435.1 Accepted alive Link to Nucleotide Sequence:NM_020051.1Link to Protein Sequence:NP_064435.1Re-query CCDS DB by Nucleotide ID:NM_020051Re-query CCDS DB by Protein ID:NP_064435Link to BLAST:NP_064435.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_064435.1 174 Q9JJR7 174 100% 0 0

Chromosomal Locations for CCDS 21737.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 109727586 109728110 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (525 nt):
ATGGACACCAGAAGCTACCCCAGCCCTCCAGACAGGCTCTCGGTCTTCGCTGAGTCGGCCCACTTACCAC
TGTCCAGGCCCTTCTACCTGGACCCCATGGTCACTGTCCACCTATGCCCCGAGACCCCGGTACCGGCCTC
TTACACAGATGAGCTGCCTCTGCTGCCCTTCTCCAGCGACACCCTGATCATGAACAATTACGGGGATCCA
TACCCTTTTCCCTTCCCCATGCCTTACACCAACTACAGGCGCTGTGACTACACCTACGGGCCGGCCTTCA
TCCGCAAGAGGAACGAGCGAGAGAGGCAACGAGTCAAGTGTGTGAACGAAGGCTACGCCCGGCTGCGGCG
GCACCTGCCGGAGGACTACCTGGAGAAACGGCTCAGCAAAGTGGAGACCCTCAGAGCTGCCATCAAATAT
ATCAGCTACCTGCAGTCTCTCTTGTACCCGGATGAATCTGAGACCAAGAAGAACCCTCGAACAGCCAGCT
GCGGCTCCCTGGACCCGGCTCTGAGAGTCATTTGA

Translation (174 aa):
MDTRSYPSPPDRLSVFAESAHLPLSRPFYLDPMVTVHLCPETPVPASYTDELPLLPFSSDTLIMNNYGDP
YPFPFPMPYTNYRRCDYTYGPAFIRKRNERERQRVKCVNEGYARLRRHLPEDYLEKRLSKVETLRAAIKY
ISYLQSLLYPDESETKKNPRTASCGSLDPALRVI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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