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Report for CCDS21549.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
21549.1 Public Mus musculus 7 Or51f2 23 108 98 CCDS HistoryNCBI Gene:259095Re-query CCDS DB by CCDS ID:21549.1Re-query CCDS DB by GeneID:259095See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 21549.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000098216.1 ENSMUSP00000095818.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000098216.1Link to Ensembl Protein Viewer:ENSMUSP00000095818.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000098216Re-query CCDS DB by Protein ID:ENSMUSP00000095818
Original member Current member NCBI NM_147091.2 NP_667302.2 Accepted alive Link to Nucleotide Sequence:NM_147091.2Link to Protein Sequence:NP_667302.2Re-query CCDS DB by Nucleotide ID:NM_147091Re-query CCDS DB by Protein ID:NP_667302Link to BLAST:NP_667302.2

Chromosomal Locations for CCDS 21549.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 102877122 102878063 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (942 nt):
ATGCTCATCCTTAATAATACCCATTCCCAGCTTCCAACCTTCCTCCTCACTGGTATCCCAGGCCTGAGAG
CA
GCTCAGGTCTGGATCTCCATTCCCTTTTGCCTCCTTTACCTTTCTGGGAACAGCATGATCCTGCTGGT
G
ATCGTTCGTGAGCAGAGCCTCCATGAGCCTATGTACTACTTTCTCTCTATGCTCTCCATCACAGACTTG
AGC
TTGTCTCTCTGCACACTTTCCACTACCCTTGGTGTCCTCTGGTTTGAAGCTCGAGAGATCAATTTAA
AT
GCGTGTATTGCCCAGATGTTCTTTCTCCATGGGTTTACTTTCATGGAATCCGGAGTTCTGCTGGCCAT
G
GCCTTTGATCGTTTTGTGGCTATCTGTGATCCACTAAGATATACCACTATTCTTACCAATGCCAGGATT
GCC
CAGATTGGCACAATTGTGTTGATAAGGAATGTTGCCGTCATGTTGCCAGTTGTGCTCTTTGTCAAGA
GG
TTGTCCTTCTGCAGTTCTCTGGTTCTTTCACATTCATACTGCTACCATGTAGATGTCATCCAGCTCTC
A
TGTACAGACAACAGAATCAATAGCGTTCTTGGTCTGTTTGCACTATTCTCTACTACAGGGTTTGACTGC
CCT
TGCATCTTGCTGTCCTATGTACTGATCATCCGATCTGTCCTCAGCATTGCTTCCTCTGATGAGCGAC
AG
AAAGCCTTCAATACATGCATATCCCACATCAGTGCTGTTGCCATCTTCTACATTCCTCTCATCAGCTT
G
TCTCTTGTACACCGCTACGGCCATTCAGCACCCGCCTTTGTCCACACCGTCATGGCCAACGTCTTCCTG
CTC
ATCCCTCCTGTGCTCAACCCTATAATCTACAGTGTGAAGACGAAGCAGATTCGAAAGGCTATTCTCA
AG
GTGTTAAATCAGAAACAAAACCAGCTTTAA


Translation (313 aa):
MLILNNTHSQLPTFLLTGIPGLRAAQVWISIPFCLLYLSGNSMILLVIVREQSLHEPMYYFLSMLSITDL
S
LSLCTLSTTLGVLWFEAREINLNACIAQMFFLHGFTFMESGVLLAMAFDRFVAICDPLRYTTILTNARI
A
QIGTIVLIRNVAVMLPVVLFVKRLSFCSSLVLSHSYCYHVDVIQLSCTDNRINSVLGLFALFSTTGFDC
P
CILLSYVLIIRSVLSIASSDERQKAFNTCISHISAVAIFYIPLISLSLVHRYGHSAPAFVHTVMANVFL
L
IPPVLNPIIYSVKTKQIRKAILKVLNQKQNQL




Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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