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Report for CCDS2146.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
2146.1 Public Homo sapiens 2 IWS1 24 110 108 CCDS HistoryNCBI Gene:55677Re-query CCDS DB by CCDS ID:2146.1Re-query CCDS DB by GeneID:55677See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 2146.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000295321.9 ENSP00000295321.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000295321.9Link to Ensembl Protein Viewer:ENSP00000295321.4Re-query CCDS DB by Nucleotide ID:ENST00000295321Re-query CCDS DB by Protein ID:ENSP00000295321
Original member Current member NCBI NM_017969.3 NP_060439.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_017969.3Link to Protein Sequence:NP_060439.2Re-query CCDS DB by Nucleotide ID:NM_017969Re-query CCDS DB by Protein ID:NP_060439Link to BLAST:NP_060439.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_060439.2 819 Q96ST2-1 819 100% 0 0

Chromosomal Locations for CCDS 2146.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 127481044 127481175 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 127486553 127486664 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 127489179 127489235 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 127489832 127489943 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 127491971 127492088 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 127493281 127493410 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 127494872 127494954 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 127495998 127496148 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 127498140 127498237 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 127502815 127502872 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 127503387 127503576 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 127504684 127505752 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 127523676 127523791 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 127526175 127526208 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2460 nt):
ATGGACTCGGAATATTACAGCGGCGACCAGTCAGATGATGGTGGTGCTACCCCAGTACAGGATGAACGGG
ATTCAGGGTCAGACGGTGAGGATGATGTAAATGAGCAACACTCCGGATCAGACACTGGAAGTGTAGAACG
TCATTCAGAGAATGAAACTAGTGATCGAGAAGATGGCCTCCCCAAAGGACATCATGTGACAGACTCTGAG
AACGATGAGCCCTTAAATCTTAATGCTAGTGACTCTGAAAGTGAGGAGCTTCACAGGCAAAAGGACAGCG
ACTCTGAATCTGAGGAACGTGCAGAGCCTCCTGCAAGCGATTCTGAAAATGAGGATGTCAATCAGCATGG
GAGCGACTCTGAGAGTGAAGAGACCAGGAAATTACCTGGTAGTGACTCTGAAAATGAGGAACTTCTTAAT
GGGCATGCAAGTGACTCAGAAAACGAAGATGTTGGGAAGCATCCCGCCAGTGATTCTGAGATTGAGGAGC
TCCAGAAGAGTCCTGCTAGTGACTCTGAAACAGAAGATGCTCTAAAACCTCAAATCAGTGACTCTGAGAG
TGAGGAACCCCCAAGGCACCAAGCCAGTGACTCCGAAAATGAGGAGCCTCCCAAACCTCGAATGAGTGAT
TCTGAAAGTGAGGAGCTTCCTAAACCTCAGGTCAGTGATTCAGAAAGTGAGGAACCCCCAAGGCACCAGG
CCAGTGACTCTGAAAATGAGGAGCTTCCCAAACCTCGTATCAGTGACTCAGAAAGTGAGGACCCTCCGAG
GCACCAGGCCAGTGACTCAGAAAATGAAGAGCTTCCCAAACCCCGAATCAGTGATTCGGAAAGTGAGGAT
CCCCCAAGGAACCAGGCCAGTGATTCGGAAAATGAGGAGCTACCCAAACCCCGAGTCAGTGACTCTGAGA
GTGAGGGGCCTCAGAAGGGGCCTGCCAGTGACTCAGAAACTGAGGATGCGTCCAGACACAAACAGAAGCC
AGAGTCAGATGATGACAGCGACAGGGAGAATAAGGGAGAGGATACAGAAATGCAGAATGACTCCTTCCAT
TCAGACAGCCATATGGACAGAAAAAAGTTTCACAGTTCTGATAGTGAGGAGGAAGAACACAAAAAGCAAA
AAATGGACAGTGATGAAGATGAAAAAGAGGGTGAGGAGGAGAAAGTAGCGAAGAGAAAAGCTGCTGTGCT
TTCTGATAGTGAAGATGAAGAGAAAGCATCAGCAAAGAAGAGTCGTGTTGTCTCTGATGCAGATGACTCT
GACAGTGATGCTGTATCAGACAAGTCAGGCAAAAGAGAGAAGACCATAGCATCTGACAGTGAGGAAGAAG
CTGGGAAAGAATTGTCTGATAAGAAAAATGAAGAGAAGGATCTGTTTGGGAGTGACAGTGAGTCAGGCAA
TGAAGAAGAAAATCTTATTGCAGACATATTTGGAGAATCTGGTGATGAAGAGGAAGAAGAATTTACAGGT
TTTAACCAAGAAGATCTGGAAGAAGAAAAAGGTGAAACACAGGTAAAAGAAGCAGAAGATTCAGATTCTG
ATGATAACATAAAGAGAGGAAAACATATGGACTTTCTGTCAGATTTTGAGATGATGTTGCAGCGAAAAAA
GAGCATGAGTGGCAAGCGCAGACGGAACCGCGATGGTGGCACCTTTATTAGTGATGCAGACGACGTCGTG
AGTGCCATGATCGTCAAGATGAATGAAGCTGCTGAGGAAGACAGACAGTTGAACAATCAAAAAAAGCCAG
CACTGAAAAAATTAACTTTACTGCCTGCTGTAGTTATGCACCTTAAGAAGCAGGACCTTAAAGAAACATT
CATTGACAGTGGTGTGATGTCTGCCATCAAAGAATGGCTCTCACCTCTACCAGATAGGAGTTTGCCTGCA
CTCAAGATCCGGGAGGAGCTGCTGAAGATCCTGCAAGAGCTGCCTAGTGTGAGCCAGGAGACCCTGAAGC
ATAGTGGGATTGGACGAGCAGTGATGTATCTCTATAAACACCCCAAGGAGTCAAGGTCTAACAAGGACAT
GGCAGGGAAATTAATCAATGAGTGGTCTAGGCCTATATTTGGTCTTACCTCAAACTACAAAGGAATGACA
AGAGAAGAAAGGGAGCAGAGAGATCTAGAACAGATGCCTCAACGACGAAGAATGAACAGCACTGGTGGTC
AGACACCCAGAAGAGACCTGGAAAAGGTGCTGACAGGAGAGGAGAAGGCTCTTAGACCTGGAGATCCTGG
ATTCTGTGCCCGTGCAAGGGTCCCAATGCCTTCAAACAAGGACTATGTTGTCAGGCCCAAATGGAATGTG
GAAATGGAGTCATCCAGGTTTCAGGCGACCTCCAAGAAGGGTATCAGTCGACTGGATAAACAGATGAGAA
AGTTCACAGATATAAGGAAAAAAAGCAGATCTGCACACGCAGTGAAAATCAGCATTGAGGGCAACAAAAT
GCCATTGTGA

Translation (819 aa):
MDSEYYSGDQSDDGGATPVQDERDSGSDGEDDVNEQHSGSDTGSVERHSENETSDREDGLPKGHHVTDSE
NDEPLNLNASDSESEELHRQKDSDSESEERAEPPASDSENEDVNQHGSDSESEETRKLPGSDSENEELLN
GHASDSENEDVGKHPASDSEIEELQKSPASDSETEDALKPQISDSESEEPPRHQASDSENEEPPKPRMSD
SESEELPKPQVSDSESEEPPRHQASDSENEELPKPRISDSESEDPPRHQASDSENEELPKPRISDSESED
PPRNQASDSENEELPKPRVSDSESEGPQKGPASDSETEDASRHKQKPESDDDSDRENKGEDTEMQNDSFH
SDSHMDRKKFHSSDSEEEEHKKQKMDSDEDEKEGEEEKVAKRKAAVLSDSEDEEKASAKKSRVVSDADDS
DSDAVSDKSGKREKTIASDSEEEAGKELSDKKNEEKDLFGSDSESGNEEENLIADIFGESGDEEEEEFTG
FNQEDLEEEKGETQVKEAEDSDSDDNIKRGKHMDFLSDFEMMLQRKKSMSGKRRRNRDGGTFISDADDVV
SAMIVKMNEAAEEDRQLNNQKKPALKKLTLLPAVVMHLKKQDLKETFIDSGVMSAIKEWLSPLPDRSLPA
LKIREELLKILQELPSVSQETLKHSGIGRAVMYLYKHPKESRSNKDMAGKLINEWSRPIFGLTSNYKGMT
REEREQRDLEQMPQRRRMNSTGGQTPRRDLEKVLTGEEKALRPGDPGFCARARVPMPSNKDYVVRPKWNV
EMESSRFQATSKKGISRLDKQMRKFTDIRKKSRSAHAVKISIEGNKMPL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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