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Report for CCDS21431.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
21431.1 Public Mus musculus 7 Or14a257 23 108 98 CCDS HistoryNCBI Gene:257905Re-query CCDS DB by CCDS ID:21431.1Re-query CCDS DB by GeneID:257905See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 21431.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000077800.2 ENSMUSP00000076973.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000077800.2Link to Ensembl Protein Viewer:ENSMUSP00000076973.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000077800Re-query CCDS DB by Protein ID:ENSMUSP00000076973
Original member Current member EBI ENSMUST00000216968.1 ENSMUSP00000149905.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000216968.1Link to Ensembl Protein Viewer:ENSMUSP00000149905.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000216968Re-query CCDS DB by Protein ID:ENSMUSP00000149905
Original member Current member EBI ENSMUST00000213223.1 ENSMUSP00000150196.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000213223.1Link to Ensembl Protein Viewer:ENSMUSP00000150196.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000213223Re-query CCDS DB by Protein ID:ENSMUSP00000150196
Original member Current member EBI ENSMUST00000217110.1 ENSMUSP00000150228.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000217110.1Link to Ensembl Protein Viewer:ENSMUSP00000150228.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000217110Re-query CCDS DB by Protein ID:ENSMUSP00000150228
Original member Current member NCBI NM_001011751.1 NP_001011751.1 Accepted alive Link to Nucleotide Sequence:NM_001011751.1Link to Protein Sequence:NP_001011751.1Re-query CCDS DB by Nucleotide ID:NM_001011751Re-query CCDS DB by Protein ID:NP_001011751Link to BLAST:NP_001011751.1

Chromosomal Locations for CCDS 21431.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 86488551 86489549 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (999 nt):
ATGTCCAATGACACTAGAATAACAGGGTTCATCCTTATGGGATTCTCGGCTGCTCCTGAACTACAGACTG
TATGTGGGCTGTTCTTTCTGGTAATGTACGTTGCAGTCATAATGAGTAACCTCCTCCTCATCACACTCAT
CACCCTGGATCTGAAACTCCAAACACCTATGTACTTTTTCTTGAAGAATTTGTCCCTGTTGGATATCTTC
TTTATTTCTGTACCAATCCCAAATTTCTTTATCAATAGCATAACTCACAATAACTCAATTTCTATTCTGG
GTTGTGCCCTCCAAGTGTTTTTAATGACTTCTTTTGCATCTGGGGATGTATTTGTTCTAACAGCAATGTC
ATATGACCACTATGTTGCCATCTGCTGTCCCCTACACTATGAGACCATCATGAGTAGTGGTAACTGTGTG
CTGATGGTGGGTGTTTCCTGGGCTATTGGAGTACTCTTTGGAGCTTTATACACAGCTGGCACATTTTCCA
TGCCTTTCTGTGGCTCCATTGTGATCCCACAGTTTTTCTGTGATGTTCCCTCATTGTTAAGGATCTCCTG
CTCTGACATACTTGTGGTCATTTATACAAGTCTTGGAATGGGTGTTTGTCTGGGCATGTCTTGTTTCATC
TGCGTTGTGATCTCTTACTTTTACATTTTCTCCACTGTGCTGAAGATTCCTACCACTAAAGGTCAGTCCA
AAGCATTTGCCACCTGCCTCCCCCATCTCACTGTTTTCAGTGTTTTCATTGTTACAGCTTGCTTTGTCTA
TCTGAAGCCACCCTCAGTTGTACCATCAATTTCAGACAGGCTGTTTTCTGTGCTACACACTGTGTTGCCT
CCAGCACTTAATCCTGTGATTTACAGCCTGAGAAATAGTGATGTCAAGCGTGCTTTGAAGAGGTTGCAAC
AAAATCTCTGTCCAAGTGGTTCACTTCATGTAACAATTCAAAGTAACTGCCCATGGTTTTGTGGCTCACA
TATTAAGCAAATTTTGTAA

Translation (332 aa):
MSNDTRITGFILMGFSAAPELQTVCGLFFLVMYVAVIMSNLLLITLITLDLKLQTPMYFFLKNLSLLDIF
FISVPIPNFFINSITHNNSISILGCALQVFLMTSFASGDVFVLTAMSYDHYVAICCPLHYETIMSSGNCV
LMVGVSWAIGVLFGALYTAGTFSMPFCGSIVIPQFFCDVPSLLRISCSDILVVIYTSLGMGVCLGMSCFI
CVVISYFYIFSTVLKIPTTKGQSKAFATCLPHLTVFSVFIVTACFVYLKPPSVVPSISDRLFSVLHTVLP
PALNPVIYSLRNSDVKRALKRLQQNLCPSGSLHVTIQSNCPWFCGSHIKQIL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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