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Report for CCDS21387.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
21387.1 Public Mus musculus 7 Mesp1 23 108 98 CCDS HistoryNCBI Gene:17292Re-query CCDS DB by CCDS ID:21387.1Re-query CCDS DB by GeneID:17292See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 21387.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000032760.5 ENSMUSP00000032760.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000032760.5Link to Ensembl Protein Viewer:ENSMUSP00000032760.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000032760Re-query CCDS DB by Protein ID:ENSMUSP00000032760
Original member Current member NCBI NM_008588.2 NP_032614.2 Accepted alive Link to Nucleotide Sequence:NM_008588.2Link to Protein Sequence:NP_032614.2Re-query CCDS DB by Nucleotide ID:NM_008588Re-query CCDS DB by Protein ID:NP_032614Link to BLAST:NP_032614.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_032614.2 243 P97309 243 100% 0 0

Chromosomal Locations for CCDS 21387.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 79792523 79792591 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 79792865 79793527 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (732 nt):
ATGGCCCAGCCCCTGTGCGAGCCGCGCTCCGAGTCCTGGATCCTGAGTCCCGCTGGTCGGCAGCCACCGA
TGCCTTCCGATGGGAACAGCGTCTGCTCCCCAGCCTGGTCCTCGGACCCGTGGGACGGTGCCCAGGCCAG
CAGCCCTGCACCACCCTGCGCCCGCCCGGCCCGGCGTGCTGGGACCCCGGGTAGGCGCGGGACGCACGGT
AGCCGCCTGGGTAGCGGACAGCGGCAGAGCGCCAGCGAGCGGGAGAAGCTACGTATGCGCACACTCGCCC
GCGCGCTGCACGAGCTGCGCCGCTTCTTGCCGCCATCCGTGGCACCAACCGGCCAGAACCTGACCAAGAT
CGAGACGCTGCGCCTGGCCATCCGCTACATTGGCCACCTGTCGGCTGTGCTGGGACTCAGCGAGGACAAC
CTCCGGCGACAGCGGCACGCGGTGTCACCTCGAGGCTGCCCGCTGTGCCCCGACAGCGACCTGGCGCAGT
CGCAGTCGCTCGGTCCCCGTTTAAGCCCGGCCGTCTGCAGCGGGGTGTCGTGGGGATCCCCGCCTGCCTA
CCCTAGACCCCGAGTCGCCGCAGAATCGTGGGACCCATCGTTCCTGTACGCAGAAACAGCATCCCAGGAA
AGGCAGGAAATGGAGCCCAGTCCCTCATCTCCGCTCTTCAGCAGCGACATGCTGGCTCTTCTAGAAACCT
GGACGCCGCCGCAGGAGTGGCCGCCTGCCTGA

Translation (243 aa):
MAQPLCEPRSESWILSPAGRQPPMPSDGNSVCSPAWSSDPWDGAQASSPAPPCARPARRAGTPGRRGTHG
SRLGSGQRQSASEREKLRMRTLARALHELRRFLPPSVAPTGQNLTKIETLRLAIRYIGHLSAVLGLSEDN
LRRQRHAVSPRGCPLCPDSDLAQSQSLGPRLSPAVCSGVSWGSPPAYPRPRVAAESWDPSFLYAETASQE
RQEMEPSPSSPLFSSDMLALLETWTPPQEWPPA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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