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Report for CCDS213.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
213.1 Public Homo sapiens 1 KIF17 24 110 108 CCDS HistoryNCBI Gene:57576Re-query CCDS DB by CCDS ID:213.1Re-query CCDS DB by GeneID:57576See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 213.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000247986.2 ENSP00000247986.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000247986.2Link to Ensembl Protein Viewer:ENSP00000247986.2Re-query CCDS DB by Nucleotide ID:ENST00000247986Re-query CCDS DB by Protein ID:ENSP00000247986
Original member Current member NCBI NM_020816.4 NP_065867.2 Accepted alive Link to Nucleotide Sequence:NM_020816.4Link to Protein Sequence:NP_065867.2Re-query CCDS DB by Nucleotide ID:NM_020816Re-query CCDS DB by Protein ID:NP_065867Link to BLAST:NP_065867.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_065867.2 1029 Q9P2E2-1 1029 100% 0 0

Chromosomal Locations for CCDS 213.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 20664584 20664762 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 20666214 20666331 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 20670421 20670491 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 20671938 20672196 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 20682653 20682884 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 20684809 20685020 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 20686046 20686126 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 20687388 20687944 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 20690188 20690335 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 20698379 20698488 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 20704447 20704899 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 20709639 20709828 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 20713454 20713555 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 20715493 20715639 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 20717476 20717706 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3090 nt):
ATGGCCTCCGAGGCGGTGAAGGTTGTCGTGCGCTGCCGTCCCATGAACCAGCGGGAGCGAGAGCTGCGCT
GCCAGCCCGTGGTGACTGTGGACTGCGCGCGCGCCCAGTGCTGCATCCAGAACCCGGGCGCCGCCGACGA
GCCGCCCAAGCAGTTCACCTTCGACGGCGCCTACCACGTGGACCACGTCACCGAGCAGATCTACAACGAG
ATCGCCTATCCGCTGGTGGAGGGCGTCACTGAGGGCTACAATGGCACCATCTTTGCCTACGGCCAGACAG
GCAGCGGGAAGTCCTTCACCATGCAGGGCCTGCCGGATCCGCCCTCCCAGAGAGGCATCATCCCCAGGGC
CTTCGAGCACGTGTTCGAGAGCGTCCAGTGTGCAGAGAACACTAAGTTCCTGGTCCGGGCCTCCTACCTG
GAGATCTACAATGAAGATGTCCGGGACCTCCTTGGGGCTGACACCAAGCAGAAGCTGGAGCTGAAGGAGC
ACCCAGAGAAGGGCGTGTACGTGAAGGGGCTGTCCATGCACACGGTGCACAGCGTGGCCCAGTGTGAGCA
CATCATGGAGACTGGCTGGAAGAACCGTTCGGTCGGCTACACGCTGATGAACAAGGATTCCTCACGCTCG
CACTCCATCTTCACCATCAGCATCGAGATGTCTGCCGTGGATGAGCGGGGCAAGGACCACCTCCGGGCGG
GCAAGCTGAACCTGGTGGACCTGGCGGGCAGCGAGCGGCAGTCCAAGACCGGGGCCACGGGCGAGCGGCT
CAAGGAGGCCACCAAGATCAACCTGTCGCTCTCGGCACTGGGCAATGTCATCTCGGCGCTGGTGGACGGG
CGCTGTAAGCACGTCCCCTACCGTGACTCGAAGCTGACGCGGCTGCTGCAGGACTCACTGGGCGGCAACA
CCAAGACGCTCATGGTGGCCTGCCTGTCGCCTGCGGACAACAACTACGATGAGACACTCAGCACGCTGCG
CTACGCCAACCGGGCCAAGAACATCAGGAACAAGCCGCGCATCAATGAGGACCCCAAGGATGCGCTGCTT
CGCGAGTACCAGGAGGAGATCAAGAAGCTCAAGGCCATCCTGACACAGCAGATGAGCCCCAGCAGCCTGT
CAGCCCTGCTGTCCAGGCAGGTGCCCCCAGACCCTGTGCAGGTGGAGGAGAAGCTGTTGCCCCAACCTGT
GATCCAGCATGACGTGGAGGCCGAGAAGCAGCTGATCCGGGAGGAGTATGAAGAGCGCCTGGCCCGGCTG
AAAGCCGACTATAAGGCCGAGCAGGAGTCTCGGGCCAGGCTGGAGGAAGACATCACTGCCATGCGCAACT
CATATGACGTCAGGCTGTCCACGCTGGAGGAGAACCTGCGGAAGGAGACAGAGGCTGTCCTGCAGGTGGG
AGTCCTCTACAAGGCTGAGGTCATGTCCAGGGCTGAGTTTGCCAGCAGCGCTGAGTACCCGCCTGCTTTT
CAGTATGAGACAGTGGTGAAACCCAAGGTCTTCTCCACGACTGACACTCTGCCCAGTGACGATGTCTCCA
AGACTCAGGTTTCCTCCAGGTTTGCGGAGCTGCCCAAGGTGGAACCCTCCAAATCTGAGATTTCTCTGGG
CTCCAGTGAGTCATCCTCGCTCGAAGAAACCTCTGTGTCCGAGGCTTTCCCTGGGCCTGAGGAGCCCTCC
AACGTGGAGGTCTCCATGCCCACTGAGGAGTCCAGGAGCAGATACTTCCTGGATGAGTGCCTCGGGCAGG
AGGCCGCTGGGCACCTGCTGGGGGAACAGAACTACCTCCCGCAAGAGGAGCCGCAGGAGGTGCCCCTGCA
GGGGTTACTAGGCCTGCAGGACCCGTTTGCCGAGGTGGAAGCCAAGCTGGCCAGACTCTCCTCCACCGTG
GCCAGGACAGATGCACCCCAGGCAGACGTCCCCAAGGTCCCTGTGCAGGTCCCTGCGCCGACAGACCTGC
TGGAGCCCAGTGATGCCAGGCCCGAAGCCGAGGCGGCTGATGACTTCCCGCCCAGGCCTGAGGTAGATCT
GGCCTCGGAAGTGGCCTTAGAGGTGGTGCGGACAGCAGAGCCTGGCGTGTGGTTGGAGGCTCAGGCCCCG
GTGGCCCTGGTGGCTCAGCCTGAGCCCCTGCCGGCCACAGCTGGTGTGAAGAGGGAGAGCGTGGGCATGG
AGGTGGCAGTGCTGACTGATGACCCGCTGCCCGTTGTGGACCAGCAGCAGGTGCTGGCCCGTCTGCAGCT
GTTGGAGCAGCAGGTTGTGGGTGGAGAGCAGGCCAAGAACAAGGACCTGAAGGAGAAGCACAAGCGGCGC
AAGCGCTACGCAGACGAGCGCAGGAAGCAGCTGGTGGCTGCCCTGCAGAACTCGGATGAGGACAGCGGGG
ACTGGGTGCTGCTTAACGTCTACGACTCCATCCAGGAGGAAGTGCGGGCCAAGAGCAAGCTGCTGGAGAA
GATGCAGAGGAAGCTTCGGGCAGCAGAGGTGGAGATCAAAGATCTGCAGTCCGAGTTTCAGCTGGAGAAG
ATCGATTACTTGGCCACCATCCGCCGGCAGGAGCGTGACTCCATGCTCTTGCAGCAGCTCCTGGAGCAGG
TGCAGCCCCTGATTCGCAGGGACTGTAACTACAGCAACCTGGAGAAGATTCTGCGTGAGTCCTGCTGGGA
CGAAGATAACGGCTTCTGGAAGATCCCACATCCCGTCATCACAAAAACCAGCCTCCCAGTAGCAGTTTCA
ACTGGGCCACAGAACAAACCAGCCCGCAAAACCTCTGCAGCAGACAATGGCGAGCCGAACATGGAGGACG
ACCGCTACAGGCTCATGCTCAGTCGGAGCAACAGTGAAAACATTGCCAGCAACTACTTCCGATCTAAGCG
GGCCAGCCAGATCCTCAGCACAGACGCCAGGAAGAGCCTCACACATCACAACTCGCCACCAGGCCTCAGC
TGCCCACTCAGCAACAACTCTGCCATCCCACCCACCCAGGCCCCTGAAATGCCCCAGCCCCGGCCCTTCC
GCCTCGAGTCCCTCGACATCCCTTTCACCAAGGCCAAGCGTAAGAAAAGCAAAAGCAACTTTGGCAGTGA
GCCTCTGTGA

Translation (1029 aa):
MASEAVKVVVRCRPMNQRERELRCQPVVTVDCARAQCCIQNPGAADEPPKQFTFDGAYHVDHVTEQIYNE
IAYPLVEGVTEGYNGTIFAYGQTGSGKSFTMQGLPDPPSQRGIIPRAFEHVFESVQCAENTKFLVRASYL
EIYNEDVRDLLGADTKQKLELKEHPEKGVYVKGLSMHTVHSVAQCEHIMETGWKNRSVGYTLMNKDSSRS
HSIFTISIEMSAVDERGKDHLRAGKLNLVDLAGSERQSKTGATGERLKEATKINLSLSALGNVISALVDG
RCKHVPYRDSKLTRLLQDSLGGNTKTLMVACLSPADNNYDETLSTLRYANRAKNIRNKPRINEDPKDALL
REYQEEIKKLKAILTQQMSPSSLSALLSRQVPPDPVQVEEKLLPQPVIQHDVEAEKQLIREEYEERLARL
KADYKAEQESRARLEEDITAMRNSYDVRLSTLEENLRKETEAVLQVGVLYKAEVMSRAEFASSAEYPPAF
QYETVVKPKVFSTTDTLPSDDVSKTQVSSRFAELPKVEPSKSEISLGSSESSSLEETSVSEAFPGPEEPS
NVEVSMPTEESRSRYFLDECLGQEAAGHLLGEQNYLPQEEPQEVPLQGLLGLQDPFAEVEAKLARLSSTV
ARTDAPQADVPKVPVQVPAPTDLLEPSDARPEAEAADDFPPRPEVDLASEVALEVVRTAEPGVWLEAQAP
VALVAQPEPLPATAGVKRESVGMEVAVLTDDPLPVVDQQQVLARLQLLEQQVVGGEQAKNKDLKEKHKRR
KRYADERRKQLVAALQNSDEDSGDWVLLNVYDSIQEEVRAKSKLLEKMQRKLRAAEVEIKDLQSEFQLEK
IDYLATIRRQERDSMLLQQLLEQVQPLIRRDCNYSNLEKILRESCWDEDNGFWKIPHPVITKTSLPVAVS
TGPQNKPARKTSAADNGEPNMEDDRYRLMLSRSNSENIASNYFRSKRASQILSTDARKSLTHHNSPPGLS
CPLSNNSAIPPTQAPEMPQPRPFRLESLDIPFTKAKRKKSKSNFGSEPL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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