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Report for CCDS21187.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
21187.1 Public Mus musculus 7 Klk15 23 108 98 CCDS HistoryNCBI Gene:317652Re-query CCDS DB by CCDS ID:21187.1Re-query CCDS DB by GeneID:317652See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 21187.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000068625.4 ENSMUSP00000066969.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000068625.4Link to Ensembl Protein Viewer:ENSMUSP00000066969.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000068625Re-query CCDS DB by Protein ID:ENSMUSP00000066969
Original member NCBI NM_174865.1 NP_777354.1 Updated not alive Link to Nucleotide Sequence:NM_174865.1Link to Protein Sequence:NP_777354.1Re-query CCDS DB by Nucleotide ID:NM_174865Re-query CCDS DB by Protein ID:NP_777354
Current member NCBI NM_174865.2 NP_777354.1 Accepted alive Link to Nucleotide Sequence:NM_174865.2Link to Protein Sequence:NP_777354.1Re-query CCDS DB by Nucleotide ID:NM_174865Re-query CCDS DB by Protein ID:NP_777354Link to BLAST:NP_777354.1

Chromosomal Locations for CCDS 21187.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 43933771 43933810 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 43937405 43937555 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 43938341 43938624 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 43938745 43938881 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 43939438 43939590 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (765 nt):
ATGTGGCTTCTCCTTGCTTTCGTCTTGCTGGTGTCTGCAGCGCAGGATGGCGACAAGGTGCTAGAAGGCG
AGGAGTGTGTGCCCCATTCACAGCCCTGGCAAGTAGCCCTCTTCGAACGTGGCCGGTTTAATTGTGGCGC
TTTCCTCATCTCACCACGCTGGGTGTTGACTGCCGCCCACTGCCAAACCCGCTTCATGAGAGTGCGCCTG
GGTGAGCACAATCTCCGCAAGTTCGATGGTCCAGAGCAACTGCGCTCCGTCTCTCGCATCATTCCACATC
CGGGCTACGAGGCTCGCACCCACCGCCATGACATTATGCTGTTGCGACTTTTCAAACCTGCCCGGCTGAC
AGCCTACGTGCGTCCTGTGGCGCTGCCCAGACGTTGCCCTCTTATCGGTGAGGACTGCGTGGTGTCAGGC
TGGGGTCTGTTATCAGACAACAACCCTGGAGCCACAGGGAGCCAGAAGTCACACGTGAGACTCCCTGATA
CGTTGCATTGTGCCAACATCAGCATTATCTCTGAAGCATCTTGCAACAAGGACTACCCGGGTCGAGTGTT
GCCCACCATGGTGTGTGCCGGCGTCGAAGGCGGTGGCACGGACTCCTGTGAGGGTGACTCCGGAGGACCC
TTGGTCTGTGGGGGTGCCCTGCAGGGCATTGTCTCCTGGGGCGATGTCCCCTGTGATACTACCACCAAGC
CTGGCGTCTACACAAAAGTCTGCAGCTACTTGGAGTGGATCTGGGAAAATGTGAGAAGGTACTGA

Translation (254 aa):
MWLLLAFVLLVSAAQDGDKVLEGEECVPHSQPWQVALFERGRFNCGAFLISPRWVLTAAHCQTRFMRVRL
GEHNLRKFDGPEQLRSVSRIIPHPGYEARTHRHDIMLLRLFKPARLTAYVRPVALPRRCPLIGEDCVVSG
WGLLSDNNPGATGSQKSHVRLPDTLHCANISIISEASCNKDYPGRVLPTMVCAGVEGGGTDSCEGDSGGP
LVCGGALQGIVSWGDVPCDTTTKPGVYTKVCSYLEWIWENVRRY


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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