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Report for CCDS20997.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
20997.1 Public Mus musculus 7 Cyp2s1 23 108 98 CCDS HistoryNCBI Gene:74134Re-query CCDS DB by CCDS ID:20997.1Re-query CCDS DB by GeneID:74134See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 20997.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000043314.9 ENSMUSP00000041175.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000043314.9Link to Ensembl Protein Viewer:ENSMUSP00000041175.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000043314Re-query CCDS DB by Protein ID:ENSMUSP00000041175
Original member Current member NCBI NM_028775.4 NP_083051.1 Accepted alive Link to Nucleotide Sequence:NM_028775.4Link to Protein Sequence:NP_083051.1Re-query CCDS DB by Nucleotide ID:NM_028775Re-query CCDS DB by Protein ID:NP_083051Link to BLAST:NP_083051.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_083051.1 501 Q9DBX6 501 100% 0 0

Chromosomal Locations for CCDS 20997.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 25803563 25803759 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 25803916 25804057 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 25805871 25806058 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 25808044 25808185 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 25809179 25809358 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 25809438 25809598 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 25811602 25811751 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 25814885 25815050 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 25816323 25816502 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1506 nt):
ATGGAGGCAGCCAGCACCTGGGCGCTGCTGCTGGCCCTGCTGCTGCTGCTGCTGCTGCTGTCTCTGACGC
TATTCAGGACCCCGGCCCGAGGCTACCTACCCCCGGGGCCCACGCCGCTGCCGTTGCTGGGGAACCTCCT
GCAGCTGCGTCCCGGGGCTCTGTACTCGGGGCTTTTGCGGCTAAGTAAGAAGTATGGGCCTGTGTTCACG
GTATACCTGGGCCCCTGGCGCCGCGTGGTGGTCCTGGTTGGACATGATGCTGTAAGAGAAGCCTTGGGAG
GTCAGGCTGAGGAATTCAGCGGGCGTGGAACATTGGCAACGCTGGACAAGACCTTTGATGGTCACGGAGT
TTTCTTTGCCAATGGGGAGCGGTGGAAACAGCTGAGGAAATTCACCCTGCTCGCTCTACGGGACCTGGGC
ATGGGCAAGCGAGAAGGCGAGGAGCTGATCCAGGCGGAGGTGCAGAGTCTGGTGGAGGCTTTCCAGAAGA
CAGAAGGACGTCCATTCAACCCTTCCATGCTGCTGGCCCAGGCCACCTCTAATGTCGTCTGTTCCCTTGT
CTTTGGCATCCGTTTGCCCTATGACGATAAAGAGTTCCAGGCTGTGATCCAGGCAGCAAGTGGTACCTTG
TTAGGGATCAGCTCTCCATGGGGCCAGGCCTACGAGATGTTCTCCTGGCTACTGCAGCCCCTGCCAGGCC
CCCACACACAGCTCCAGCACCACTTGGGCACCCTGGCTGCCTTCACTATCCAGCAGGTACAGAAACACCA
GGGACGCTTCCAAACCTCAGGTCCTGCACGTGATGTCGTTGACGCCTTCCTGCTAAAGATGGCACAGGAG
AAACAAGACCCAGGTACAGAATTCACCGAGAAGAACTTGCTGATGACGGTCACATACCTGCTGTTTGCTG
GGACCATGACCATCGGTGCCACCATCCGCTATGCCCTCCTGCTCCTGCTGAGATACCCTCAAGTCCAGCA
GCGCGTCCGGGAGGAGCTCATACAGGAGCTGGGTCCTGGCAGGGCTCCAAGTCTCAGCGATCGAGTTCGC
CTCCCTTACACGGATGCCGTTTTACACGAGGCACAGCGGCTCCTGGCACTGGTACCCATGGGCATGCCCC
ACACCATCACGAGGACCACTTGCTTCCGAGGGTACACTCTGCCCAAGGGCACTGAGGTCTTCCCTCTGAT
TGGCTCCATACTGCATGACCCTGCGGTTTTCCAGAACCCAGGAGAGTTCCATCCAGGCCGCTTCCTGGAC
GAAGATGGTCGGTTGAGAAAACACGAAGCCTTCCTGCCCTACTCCTTAGGTAAGCGAGTCTGCCTGGGAG
AAGGCCTGGCTCGGGCGGAGTTGTGGCTTTTCTTCACTTCCATCTTGCAAGCCTTCTCCCTGGAGACCCC
GTGCCCGCCGGGTGACCTGAGCCTGAAGCCAGCCATCAGTGGACTTTTCAACATCCCCCCGGACTTCCAG
CTGCGGGTCTGGCCCACTGGCGACCAGTCCAGATGA

Translation (501 aa):
MEAASTWALLLALLLLLLLLSLTLFRTPARGYLPPGPTPLPLLGNLLQLRPGALYSGLLRLSKKYGPVFT
VYLGPWRRVVVLVGHDAVREALGGQAEEFSGRGTLATLDKTFDGHGVFFANGERWKQLRKFTLLALRDLG
MGKREGEELIQAEVQSLVEAFQKTEGRPFNPSMLLAQATSNVVCSLVFGIRLPYDDKEFQAVIQAASGTL
LGISSPWGQAYEMFSWLLQPLPGPHTQLQHHLGTLAAFTIQQVQKHQGRFQTSGPARDVVDAFLLKMAQE
KQDPGTEFTEKNLLMTVTYLLFAGTMTIGATIRYALLLLLRYPQVQQRVREELIQELGPGRAPSLSDRVR
LPYTDAVLHEAQRLLALVPMGMPHTITRTTCFRGYTLPKGTEVFPLIGSILHDPAVFQNPGEFHPGRFLD
EDGRLRKHEAFLPYSLGKRVCLGEGLARAELWLFFTSILQAFSLETPCPPGDLSLKPAISGLFNIPPDFQ
LRVWPTGDQSR


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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