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Report for CCDS20833.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
20833.1 Public Mus musculus 7 Sult2a8 23 108 98 CCDS HistoryNCBI Gene:76971Re-query CCDS DB by CCDS ID:20833.1Re-query CCDS DB by GeneID:76971See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 20833.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000063509.10 ENSMUSP00000066897.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000063509.10Link to Ensembl Protein Viewer:ENSMUSP00000066897.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000063509Re-query CCDS DB by Protein ID:ENSMUSP00000066897
Original member Current member EBI ENSMUST00000168252.8 ENSMUSP00000128428.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000168252.8Link to Ensembl Protein Viewer:ENSMUSP00000128428.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000168252Re-query CCDS DB by Protein ID:ENSMUSP00000128428
Original member Current member NCBI NM_001199306.1 NP_001186235.1 Accepted alive Link to Nucleotide Sequence:NM_001199306.1Link to Protein Sequence:NP_001186235.1Re-query CCDS DB by Nucleotide ID:NM_001199306Re-query CCDS DB by Protein ID:NP_001186235Link to BLAST:NP_001186235.1
Original member Current member NCBI NM_175250.5 NP_780459.1 Accepted alive Link to Nucleotide Sequence:NM_175250.5Link to Protein Sequence:NP_780459.1Re-query CCDS DB by Nucleotide ID:NM_175250Re-query CCDS DB by Protein ID:NP_780459Link to BLAST:NP_780459.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001186235.1 282 Q8BGL3-1 282 100% 0 0
NP_780459.1 282 Q8BGL3-1 282 100% 0 0

Chromosomal Locations for CCDS 20833.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 14411707 14411819 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 14413629 14413797 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 14416218 14416312 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 14423437 14423563 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 14425348 14425556 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 14427784 14427919 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (849 nt):
ATGACAGATGAATTTCTGTGGATAGAAGGGATACCATTCCCTACAGTTTACTACTCACAAGAAATCATAA
GAGAAGTACGTGACAGGTTTGTGGTAAGGGATGAAGACACGATCATAGTGACTTATCCAAAATCAGGAAC
CCACTGGTTGAATGAAATTGTCTGCTTGATTCTGACCAAGGGAGATCCCACATGGGTCCAATCTACAATT
GCCAATGAGCGCACACCATGGATAGAATTTGAAAATAACTATAGAATACTAAACAGCAAGGAGGGTCCAC
GTCTCATGGCCTCTCTCCTTCCCATCCAACTATTTCCAAAGTCTTTCTTCAGTTCTAAGGCAAAGGTGAT
TTATCTCATCAGAAATCCCAGAGATGTTCTTGTGTCAGGCTATCACTACTTCAATGCTCTAAAACAGGGA
AAGGAACAAGTGCCATGGAAAATATATTTTGAGAACTTTTTGCAAGGAAAATCATATTTTGGATCATGGT
TCGAACATGCATGTGGCTGGATATCCCTGAGGAAAAGAGAAAACATTCTAGTGTTAAGTTATGAACAGCT
GAAAAAGGATACAAGAAATACCATCAAGAAGATCTGTGAATTCCTGGGAGAGAATTTGGAATCAGGGGAA
CTGGAGTTAGTTTTGAAGAACATTTCTTTTCAGATCATGAAAGAAAGGATGATATCTCAGTCATGTCTCT
CAAATATAGAAAAACATGAATTCATTATGAGAAAAGGCATCACAGGGGACTGGAAGAATCACTTTACAGT
AGCCCAGGCTGAAGCCTTTGATAAAGCATTTCAGGAGAAAGCAGCTGATTTTCCTCAAGAGCTCTTTTCA
TGGGAATAA

Translation (282 aa):
MTDEFLWIEGIPFPTVYYSQEIIREVRDRFVVRDEDTIIVTYPKSGTHWLNEIVCLILTKGDPTWVQSTI
ANERTPWIEFENNYRILNSKEGPRLMASLLPIQLFPKSFFSSKAKVIYLIRNPRDVLVSGYHYFNALKQG
KEQVPWKIYFENFLQGKSYFGSWFEHACGWISLRKRENILVLSYEQLKKDTRNTIKKICEFLGENLESGE
LELVLKNISFQIMKERMISQSCLSNIEKHEFIMRKGITGDWKNHFTVAQAEAFDKAFQEKAADFPQELFS
WE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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