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Report for CCDS20062.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
20062.1 Public Mus musculus 6 Tas2r144 23 108 98 CCDS HistoryNCBI Gene:387515Re-query CCDS DB by CCDS ID:20062.1Re-query CCDS DB by GeneID:387515See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 20062.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000063489.3 ENSMUSP00000067734.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000063489.3Link to Ensembl Protein Viewer:ENSMUSP00000067734.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000063489Re-query CCDS DB by Protein ID:ENSMUSP00000067734
Original member Current member NCBI NM_001001453.1 NP_001001453.1 Accepted alive Link to Nucleotide Sequence:NM_001001453.1Link to Protein Sequence:NP_001001453.1Re-query CCDS DB by Nucleotide ID:NM_001001453Re-query CCDS DB by Protein ID:NP_001001453Link to BLAST:NP_001001453.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001001453.1 319 Q7TQB8 319 100% 0 0

Chromosomal Locations for CCDS 20062.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 6 (NC_000072.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 42215328 42216287 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (960 nt):
ATGGCAATAATTACCACAAATTCTGACTATTTTGCTCACAGGTATGAAGTCATAATCCCTTTCGTGGTCT
CTACAATATGCTCTATTGTTGGCATCATTGGCAATGGCTTCATCACAGTCATCTATGGGACTGAATGGGT
CAGGAGCAAAAGACTCCCCACTGGTGAGAACCTTATGTTGATGCTGAGTTTTTCCAGGCTGTTGCTACAG
ATATGGATGATGGTAGAGATTACTTATAGTCTACTTTTCCCGATCATTTATAACCATAATGCCATGTATA
AACTATTCAAAGCCATCTCTGTGTTTCTAAACTACTGTAACCTCTGGTTTGCTGCTTGGCTCAATGTCTT
CTATTGTCTTAAAATTGTGAACTTAGCTCACCCTCTGTTCCTTCTGATGAAGCAGAAAATCATAGGGCTG
ATGCCTCGGCTCCTGAGTCTGTCAGTGTTGGTTTCCTTCAGCTTAAGTTCCTTCTTCTCTAAAGACATCT
TAAATGTGTATGTGAACACTTCTGTTCCCATCCCTTCTTCCAACTCCACAAAGATGAAGTACATCTTTAT
GATCAATGTACTCAGCCTAGCTTTCTTGTATTATATGGGGATCTTCCTTCCTTTGTTCATGTTCATCATG
GCAGCCACTCTGCTGATCACCTCACTCAAGAGGCACACCCTGCACATGGAAAACAGCACCACAGGCTCTA
GGGACTCCAGCATGGAGGCTCACGTGGGTGCCATCAAATCGACCAGCCACTCTCTCATTCTCTACATTAT
TAATGCACTGGCTTTATTTATTTCCATGTCAAACATCCTTGGTGCTTACAGTGTCTGGAATAGTTTGTGC
AACATTATCATGACTGCCTATCCAGCCGGCCAGTCAGTGCATCTGATCTTGAGAAATCCAGGGCTGAGAA
GAGCCTGGAGGCGGTTTCAGCACCATGTTCATCTTTACCTTAAAAGGTAG

Translation (319 aa):
MAIITTNSDYFAHRYEVIIPFVVSTICSIVGIIGNGFITVIYGTEWVRSKRLPTGENLMLMLSFSRLLLQ
IWMMVEITYSLLFPIIYNHNAMYKLFKAISVFLNYCNLWFAAWLNVFYCLKIVNLAHPLFLLMKQKIIGL
MPRLLSLSVLVSFSLSSFFSKDILNVYVNTSVPIPSSNSTKMKYIFMINVLSLAFLYYMGIFLPLFMFIM
AATLLITSLKRHTLHMENSTTGSRDSSMEAHVGAIKSTSHSLILYIINALALFISMSNILGAYSVWNSLC
NIIMTAYPAGQSVHLILRNPGLRRAWRRFQHHVHLYLKR


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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