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Report for CCDS20049.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
20049.1 Public Mus musculus 6 Prss1 23 108 98 CCDS HistoryNCBI Gene:114228Re-query CCDS DB by CCDS ID:20049.1Re-query CCDS DB by GeneID:114228See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 20049.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000031910.7 ENSMUSP00000031910.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000031910.7Link to Ensembl Protein Viewer:ENSMUSP00000031910.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000031910Re-query CCDS DB by Protein ID:ENSMUSP00000031910
Original member Current member NCBI NM_053243.2 NP_444473.1 Accepted alive Link to Nucleotide Sequence:NM_053243.2Link to Protein Sequence:NP_444473.1Re-query CCDS DB by Nucleotide ID:NM_053243Re-query CCDS DB by Protein ID:NP_444473Link to BLAST:NP_444473.1

Chromosomal Locations for CCDS 20049.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 6 (NC_000072.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 41458943 41458982 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 41461181 41461340 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 41462535 41462788 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 41463185 41463321 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 41463584 41463733 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (741 nt):
ATGAGTGCACTCCTGTTCCTGGCCCTTGTGGGAGCTGCTGTTGCTTTCCCTGTGGATGATGATGACAAGA
TCGTTGGAGGATACACCTGCCGAGAGAATTCTGTTCCCTACCAGGTGTCCCTGAACTCTGGCTACCACTT
CTGTGGAGGTTCCCTCATCAATGACCAGTGGGTGGTGTCTGCAGCTCATTGCTACAAGACCCGCATCCAA
GTGAGATTGGGGGAGCACAATATCAATGTCCTGGAGGGCAATGAGCAGTTTATCGATGCTGCCAAGATCA
TCAAGCACCCCAACTTCAATAGGAAGACCCTGAACAATGACATCATGTTGATCAAGCTCTCATCCCCTGT
GACCCTCAATGCCAGAGTGGCCACTGTGGCTCTGCCCAGCTCCTGTGCACCTGCTGGCACTCAGTGTCTC
ATCTCTGGCTGGGGCAACACTCTTAGCTTTGGTGTCAGTGAACCAGACCTGCTCCAGTGCCTGGATGCCC
CACTGCTGCCTCAGGCTGACTGTGAGGCTTCCTATCCTGGGAAGATCACTGGTAACATGGTCTGTGCTGG
CTTCCTAGAGGGAGGCAAGGATTCCTGCCAGGGTGACTCTGGTGGCCCTGTGGTCTGCAATGGAGAGCTC
CAGGGCATTGTCTCTTGGGGCTATGGCTGTGCCCTGCCAGACAATCCTGGTGTGTACACCAAGGTCTGCA
ACTATGTGGATTGGATTCAGGACACAATTGCTGCCAACTAG

Translation (246 aa):
MSALLFLALVGAAVAFPVDDDDKIVGGYTCRENSVPYQVSLNSGYHFCGGSLINDQWVVSAAHCYKTRIQ
VRLGEHNINVLEGNEQFIDAAKIIKHPNFNRKTLNNDIMLIKLSSPVTLNARVATVALPSSCAPAGTQCL
ISGWGNTLSFGVSEPDLLQCLDAPLLPQADCEASYPGKITGNMVCAGFLEGGKDSCQGDSGGPVVCNGEL
QGIVSWGYGCALPDNPGVYTKVCNYVDWIQDTIAAN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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