NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq

Report for CCDS19569.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
19569.1 Public Mus musculus 5 Gltp 23 108 98 CCDS HistoryNCBI Gene:56356Re-query CCDS DB by CCDS ID:19569.1Re-query CCDS DB by GeneID:56356See the combined annotation on chromosome 5 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 19569.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000012028.13 ENSMUSP00000012028.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000012028.13Link to Ensembl Protein Viewer:ENSMUSP00000012028.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000012028Re-query CCDS DB by Protein ID:ENSMUSP00000012028
Original member Current member NCBI NM_019821.2 NP_062795.2 Accepted alive Link to Nucleotide Sequence:NM_019821.2Link to Protein Sequence:NP_062795.2Re-query CCDS DB by Nucleotide ID:NM_019821Re-query CCDS DB by Protein ID:NP_062795Link to BLAST:NP_062795.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_062795.2 209 Q9JL62 209 100% 0 0

Chromosomal Locations for CCDS 19569.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 5 (NC_000071.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5See the combined annotation on chromosome 5 in Sequence Viewer

Chromosome Start Stop Links
5 114670407 114670589 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 114674054 114674204 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 114676265 114676398 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 114677621 114677679 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 114690759 114690861 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (630 nt):
ATGGCGCTGCTGGCCGAGCACCTGCTCAAGCCGCTGCCCGCAGACCGGCAGATCGAGACCGGGCCCTTCC
TGGAGGCTGTGGCTCACCTGCCGCCCTTCTTTGATTGCCTTGGGTCCCCGGTATTCACGCCCATCAAGGC
AGACATAAGCGGTAACATCACCAAAATCAAAGCCGTATATGACACCGACCCAGCCAAGTTCAAGACCCTG
CAGAACATCCTGGAGGTGGAGAAGGGGATGTATGGGGCGGAGTGGCCTAAAGTGGGGGCCACTCTGGCAC
TGCTGTGGCTGAAAAGGGGCCTGCGCTTCATCCAGGTGTTCCTGCAGAGCATCTGCGATGGGGAACGCGA
CGAGAACCACCCCAACCTCATCCGAGTCAACGCCAACAAGGCCTATGAGATGGCCCTGAAGAAGTACCAT
GGCTGGCTGGTGCAGAAGATCTTCAAGGCCGCCCTGTACGCAGCACCTTACAAGTCCGACTTCCTCAAGG
CACTCTCCAAGGGGCAGAACGTGACAGAGGAGGAGTGCCTGGAGAAGATCCGCCTCTTCCTGGTCAACTA
CACGGCCACCATTGACGCCATCTACGACATGTACACCAAGATGAATGCGGAGCTTGACTACACAGTGTAG

Translation (209 aa):
MALLAEHLLKPLPADRQIETGPFLEAVAHLPPFFDCLGSPVFTPIKADISGNITKIKAVYDTDPAKFKTL
QNILEVEKGMYGAEWPKVGATLALLWLKRGLRFIQVFLQSICDGERDENHPNLIRVNANKAYEMALKKYH
GWLVQKIFKAALYAAPYKSDFLKALSKGQNVTEEECLEKIRLFLVNYTATIDAIYDMYTKMNAELDYTV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH