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Report for CCDS193.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
193.1 Public Homo sapiens 1 AKR7A3 24 110 108 CCDS HistoryNCBI Gene:22977Re-query CCDS DB by CCDS ID:193.1Re-query CCDS DB by GeneID:22977See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 193.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000361640.5 ENSP00000355377.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000361640.5Link to Ensembl Protein Viewer:ENSP00000355377.4Re-query CCDS DB by Nucleotide ID:ENST00000361640Re-query CCDS DB by Protein ID:ENSP00000355377
Original member Current member NCBI NM_012067.3 NP_036199.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_012067.3Link to Protein Sequence:NP_036199.2Re-query CCDS DB by Nucleotide ID:NM_012067Re-query CCDS DB by Protein ID:NP_036199Link to BLAST:NP_036199.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_036199.2 331 O95154 331 100% 0 0

Chromosomal Locations for CCDS 193.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 19282731 19282892 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 19283996 19284125 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 19284686 19284785 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 19285018 19285114 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 19285888 19285992 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 19286185 19286372 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 19288496 19288709 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (996 nt):
ATGTCCCGGCAGCTGTCGCGGGCCCGGCCAGCCACGGTGCTGGGCGCCATGGAGATGGGGCGCCGCATGG
ACGCGCCCACCAGCGCCGCAGTCACGCGCGCCTTCCTGGAGCGCGGCCACACCGAGATAGACACGGCCTT
CGTGTACAGCGAGGGCCAGTCCGAGACCATCCTTGGCGGCCTGGGGCTCCGGCTGGGCGGCAGCGACTGC
AGAGTGAAAATTGATACCAAGGCCATTCCACTGTTTGGGAACTCCCTGAAGCCTGACAGTCTCCGGTTCC
AGCTGGAGACGTCACTGAAGCGGCTGCAGTGTCCCCGAGTGGACCTCTTCTACCTGCATATGCCAGACCA
CAGCACCCCGGTGGAAGAGACACTGCGTGCCTGCCACCAGCTGCACCAGGAGGGCAAGTTCGTGGAGCTT
GGCCTCTCCAACTATGCAGCCTGGGAAGTGGCCGAGATCTGTACCCTCTGCAAGAGCAACGGCTGGATCC
TGCCCACTGTGTACCAGGGCATGTACAATGCCATCACCCGGCAGGTGGAAACGGAGCTCTTCCCCTGCCT
CAGGCACTTTGGACTGAGGTTCTATGCCTTCAACCCTCTGGCTGGGGGCCTGCTGACCGGCAAGTACAAG
TATGAGGACAAGAATGGGAAACAGCCCGTGGGCCGCTTCTTTGGGAATACCTGGGCAGAGATGTACAGGA
ATCGCTACTGGAAGGAGCACCACTTTGAGGGCATTGCCCTGGTGGAGAAGGCCCTGCAGGCCGCGTATGG
CGCCAGCGCCCCCAGCATGACCTCGGCCACCCTCCGGTGGATGTACCACCACTCACAGCTGCAGGGTGCC
CACGGGGACGCGGTCATCCTGGGCATGTCCAGCCTGGAGCAGCTGGAGCAGAACTTGGCAGCGGCAGAGG
AAGGGCCCCTGGAGCCGGCTGTCGTGGACGCCTTTAATCAAGCCTGGCATTTGGTTACTCACGAATGTCC
CAACTACTTCCGCTAG

Translation (331 aa):
MSRQLSRARPATVLGAMEMGRRMDAPTSAAVTRAFLERGHTEIDTAFVYSEGQSETILGGLGLRLGGSDC
RVKIDTKAIPLFGNSLKPDSLRFQLETSLKRLQCPRVDLFYLHMPDHSTPVEETLRACHQLHQEGKFVEL
GLSNYAAWEVAEICTLCKSNGWILPTVYQGMYNAITRQVETELFPCLRHFGLRFYAFNPLAGGLLTGKYK
YEDKNGKQPVGRFFGNTWAEMYRNRYWKEHHFEGIALVEKALQAAYGASAPSMTSATLRWMYHHSQLQGA
HGDAVILGMSSLEQLEQNLAAAEEGPLEPAVVDAFNQAWHLVTHECPNYFR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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