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Report for CCDS1913.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
1913.1 Public Homo sapiens 2 ANKRD53 24 110 108 CCDS HistoryNCBI Gene:79998Re-query CCDS DB by CCDS ID:1913.1Re-query CCDS DB by GeneID:79998See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 1913.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000272421.10 ENSP00000272421.6 Accepted alive Link to Ensembl Transcript Viewer:ENST00000272421.10Link to Ensembl Protein Viewer:ENSP00000272421.6Re-query CCDS DB by Nucleotide ID:ENST00000272421Re-query CCDS DB by Protein ID:ENSP00000272421
Original member Current member NCBI NM_024933.4 NP_079209.3 Accepted alive Link to Nucleotide Sequence:NM_024933.4Link to Protein Sequence:NP_079209.3Re-query CCDS DB by Nucleotide ID:NM_024933Re-query CCDS DB by Protein ID:NP_079209Link to BLAST:NP_079209.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_079209.3 343 Q8N9V6-2 343 100% 0 0

Chromosomal Locations for CCDS 1913.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 70978646 70978815 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 70979097 70979343 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 70979661 70979860 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 70981936 70982100 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 70982577 70982697 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 70984123 70984249 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 70984611 70984612 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1032 nt):
ATGGCCTCCGCGGGCAGCACCGCTCGGCGGGCGGGCTCCGGAAGCTGGCACTCAGAAAGGGGAGAAGGGA
GAGGTGCTCGGCCGCAGCCAACTCCAAGTGGCTCCATGCAGCAGGCGAACAAAGTCTCCTTGAAGGCCAC
CTGGACTGACGCGGAGTCCAAGCAGCCCAGCCAGCCCCTGCCCGACCTCGCAGACCACCTCAGTGCGCAG
GCGACTGCCCTCGCCAGGCCGCGCCGCCCTGCCTCGCTCACCCCGCCCCGCGCTGACCCCAGCCCCAGCA
AGGAGTCCGACCAGACGGCAATCGACCAGACGGCGATCGGGAGCTACTACCAGCTGTTCGCAGCGGCTGT
GGGCAACGTGGAATGGCTGCGATTCTGTCTGAACCAGAGCCTCAGGGAAATCCCCACCGACGACAAGGGC
TTCACTGCCATCCACTTCGCCGCCCAATGGGGCAAGCTTGCATGCCTGCAGGTCCTGGTAGAGGAGTACA
AGTTTCCCGTGGACCTGCTGACCAACAATAGCCAGACACCCCTGCACCTCGTCATCCACAGGGACAACAC
CACCGTGGCCCTCCCCTGCATCTACTACCTGCTGGAGAAAGGCGCAGACCTCAATGCTCAGACATGCAAC
GGCTCCACGCCCCTGCACCTGGCAGCCCGTGACGGCTTGCTGGACTGTGTGAAGGTCCTGGTGCAGAGTG
GCGCCAACGTCCATGCCCAAGATGCCATGGGCTACAAACCCATTGACTTCTGCAAAATATGGAACCACCG
TGCCTGTGCCCGGTTCTTGAAGGATGCCATGTGGAAAAAGGACAAGAAGGACTTTGCCCGTGAGATGACG
AAAATGAAGATGTTCAAGAGCCAGCTGACCCTCATGGAGCACAACTACCTGATTGAGTATCAAGGTCAAG
GATGCAGTGTGCACTTCCCATTTGCCTTTTCCCCCATCACACCAGAGACTCTCCTATGGCAGGACATTTC
TCTACTATCAGACTGTGGATTCCTTTGGAGAAGAAGGGAATTGTCTTTCTAA

Translation (343 aa):
MASAGSTARRAGSGSWHSERGEGRGARPQPTPSGSMQQANKVSLKATWTDAESKQPSQPLPDLADHLSAQ
ATALARPRRPASLTPPRADPSPSKESDQTAIDQTAIGSYYQLFAAAVGNVEWLRFCLNQSLREIPTDDKG
FTAIHFAAQWGKLACLQVLVEEYKFPVDLLTNNSQTPLHLVIHRDNTTVALPCIYYLLEKGADLNAQTCN
GSTPLHLAARDGLLDCVKVLVQSGANVHAQDAMGYKPIDFCKIWNHRACARFLKDAMWKKDKKDFAREMT
KMKMFKSQLTLMEHNYLIEYQGQGCSVHFPFAFSPITPETLLWQDISLLSDCGFLWRRRELSF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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