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Report for CCDS1869.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
1869.1 Public Homo sapiens 2 COMMD1 24 110 108 CCDS HistoryNCBI Gene:150684Re-query CCDS DB by CCDS ID:1869.1Re-query CCDS DB by GeneID:150684See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 1869.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000311832.6 ENSP00000308236.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000311832.6Link to Ensembl Protein Viewer:ENSP00000308236.5Re-query CCDS DB by Nucleotide ID:ENST00000311832Re-query CCDS DB by Protein ID:ENSP00000308236
Original member Current member NCBI NM_152516.4 NP_689729.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_152516.4Link to Protein Sequence:NP_689729.1Re-query CCDS DB by Nucleotide ID:NM_152516Re-query CCDS DB by Protein ID:NP_689729Link to BLAST:NP_689729.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_689729.1 190 Q8N668-1 190 100% 0 0

Chromosomal Locations for CCDS 1869.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 61905679 61905858 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 62000701 62000982 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 62135831 62135941 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (573 nt):
ATGGCGGCGGGCGAGCTTGAGGGTGGCAAACCCCTGAGCGGGCTGCTGAATGCGCTGGCCCAGGACACTT
TCCACGGGTACCCCGGCATCACAGAGGAGCTGCTACGGAGCCAGCTATATCCAGAGGTGCCACCCGAGGA
GTTCCGCCCCTTTCTGGCAAAGATGAGGGGGATTCTTAAGTCTATTGCGTCTGCAGACATGGATTTCAAC
CAGCTGGAGGCATTCTTGACTGCTCAAACCAAAAAGCAAGGTGGGATCACATCTGACCAAGCTGCTGTCA
TTTCCAAATTCTGGAAGAGCCACAAGACAAAAATCCGTGAGAGCCTCATGAACCAGAGCCGCTGGAATAG
CGGGCTTCGGGGCCTGAGCTGGAGAGTTGATGGCAAGTCTCAGTCAAGGCACTCAGCTCAAATACACACA
CCTGTTGCCATTATAGAGCTGGAATTAGGCAAATATGGACAGGAATCTGAATTTCTGTGTTTGGAATTTG
ATGAGGTCAAAGTCAACCAAATTCTGAAGACGCTGTCAGAGGTAGAAGAAAGTATCAGCACACTGATCAG
CCAGCCTAACTGA

Translation (190 aa):
MAAGELEGGKPLSGLLNALAQDTFHGYPGITEELLRSQLYPEVPPEEFRPFLAKMRGILKSIASADMDFN
QLEAFLTAQTKKQGGITSDQAAVISKFWKSHKTKIRESLMNQSRWNSGLRGLSWRVDGKSQSRHSAQIHT
PVAIIELELGKYGQESEFLCLEFDEVKVNQILKTLSEVEESISTLISQPN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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