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Report for CCDS1863.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
1863.1 Public Homo sapiens 2 PAPOLG 24 110 108 CCDS HistoryNCBI Gene:64895Re-query CCDS DB by CCDS ID:1863.1Re-query CCDS DB by GeneID:64895See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 1863.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000238714.8 ENSP00000238714.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000238714.8Link to Ensembl Protein Viewer:ENSP00000238714.3Re-query CCDS DB by Nucleotide ID:ENST00000238714Re-query CCDS DB by Protein ID:ENSP00000238714
Original member Current member NCBI NM_022894.4 NP_075045.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_022894.4Link to Protein Sequence:NP_075045.2Re-query CCDS DB by Nucleotide ID:NM_022894Re-query CCDS DB by Protein ID:NP_075045Link to BLAST:NP_075045.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_075045.2 736 Q9BWT3-1 736 100% 0 0

Chromosomal Locations for CCDS 1863.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 60756479 60756495 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 60760134 60760295 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 60761741 60761807 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 60768470 60768551 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 60768781 60768890 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 60770458 60770511 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 60771519 60771630 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 60775034 60775123 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 60779637 60779775 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 60780707 60780779 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 60781885 60782005 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 60782686 60782770 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 60783156 60783209 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 60786947 60787066 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 60787511 60787620 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 60791761 60791882 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 60792129 60792289 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 60793627 60793715 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 60793971 60794191 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 60794710 60794775 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 60794964 60795020 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 60797062 60797160 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2211 nt):
ATGAAAGAGATGTCTGCAAACACCGTGCTGGACAGCCAGCGTCAACAAAAGCATTATGGAATTACCTCCC
CAATTAGTTTGGCATCTCCTAAAGAAATTGATCATATTTACACACAGAAATTAATTGACGCCATGAAACC
ATTTGGAGTGTTTGAAGATGAGGAAGAATTGAACCACAGGCTGGTGGTTCTTGGTAAATTGAACAATTTA
GTAAAAGAATGGATTTCTGATGTCAGCGAGAGTAAGAACCTCCCACCTTCTGTTGTGGCTACTGTTGGTG
GTAAAATTTTCACATTTGGATCCTATAGGCTTGGAGTACACACCAAAGGAGCTGACATTGATGCACTTTG
TGTAGCTCCAAGACATGTGGAAAGATCTGATTTTTTTCAGTCTTTTTTTGAAAAATTGAAACATCAAGAT
GGCATTAGAAACTTAAGAGCTGTAGAAGATGCCTTTGTACCTGTTATAAAATTTGAATTTGATGGTATTG
AAATTGATCTAGTCTTTGCAAGACTGGCAATACAAACCATATCAGATAATTTAGATCTAAGAGACGACTC
TCGCCTGAGAAGCCTTGATATAAGGTGTATTCGCAGCTTAAATGGTTGTAGAGTTACTGATGAAATTTTG
CATTTAGTGCCAAATAAAGAAACTTTTAGACTCACCCTAAGAGCTGTCAAATTATGGGCAAAACGACGTG
GTATTTATTCCAACATGCTAGGATTCCTTGGTGGTGTCTCCTGGGCAATGCTAGTTGCAAGAACTTGCCA
ATTGTATCCAAATGCAGCAGCATCTACTTTAGTTCATAAGTTCTTTTTAGTTTTTTCCAAGTGGGAATGG
CCAAATCCTGTGCTGCTGAAGCAACCAGAAGAAAGCAATTTGAATTTGCCTGTCTGGGATCCTCGGGTAA
ATCCATCAGATAGGTATCATCTCATGCCCATAATCACCCCTGCCTACCCACAACAGAATTCTACGTATAA
TGTGTCCACATCAACTCGAACAGTAATGGTAGAAGAATTTAAACAAGGTCTTGCAGTCACAGATGAAATT
CTTCAAGGAAAGTCAGATTGGTCCAAACTACTTGAGCCACCGAATTTCTTTCAAAAGTATAGACATTATA
TAGTATTGACTGCCAGCGCATCAACAGAAGAAAACCATCTAGAGTGGGTTGGATTAGTAGAATCTAAAAT
CCGTGTACTTGTTGGAAACTTGGAACGGAATGAATTTATTACTCTTGCCCATGTGAATCCCCAGTCATTC
CCAGGGAATAAGGAACATCATAAAGACAACAATTACGTATCAATGTGGTTCCTTGGGATAATTTTTCGGA
GAGTAGAAAATGCAGAAAGTGTCAACATAGACTTGACATATGATATACAGTCATTTACTGATACAGTGTA
CAGACAGGCAAACAATATAAATATGCTAAAGGAGGGAATGAAAATTGAAGCAACTCATGTAAAGAAAAAA
CAACTTCACCACTACCTTCCTGCAGAAATTCTTCAAAAGAAGAAAAAGCAAAGTCTCTCTGATGTCAATC
GAAGCTCGGGCGGACTTCAATCCAAAAGATTGTCTCTGGATAGCAGTTGTCTGGATAGCTCCAGAGACAC
TGATAATGGAACACCTTTTAATTCTCCAGCGTCCAAGTCTGATAGCCCTTCTGTAGGAGAAACAGAAAGG
AATAGTGCTGAGCCTGCTGCTGTAATTGTGGAGAAGCCACTGAGTGTACCACCAGCCCAAGGACTTTCCA
TTCCAGTGATTGGCGCAAAAGTTGACTCTACAGTAAAAACTGTATCACCCCCCACTGTGTGTACCATTCC
TACCGTAGTAGGACGAAATGTCATTCCTAGAATCACAACACCTCACAACCCTGCCCAGGGACAACCGCAT
CTGAATGGAATGTCAAATATAACTAAGACTGTTACACCTAAGAGATCCCATTCCCCATCCATAGATGGGA
CTCCTAAGAGGTTGAAAGACGTAGAAAAGTTTATTCGACTTGAATCAACATTTAAGGACCCCCGCACTGC
TGAAGAAAGAAAAAGAAAATCAGTGGATGCCATTGGAGGAGAATCTATGCCTATTCCAACTATTGATACA
TCACGCAAAAAGAGACTACCCAGTAAAGAACTACCAGATTCATCATCTCCAGTTCCAGCAAACAACATCC
GTGTCATCAAAAATTCCATTCGACTGACCCTTAATCGGTAA

Translation (736 aa):
MKEMSANTVLDSQRQQKHYGITSPISLASPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNL
VKEWISDVSESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERSDFFQSFFEKLKHQD
GIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLNGCRVTDEIL
HLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEW
PNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEI
LQGKSDWSKLLEPPNFFQKYRHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSF
PGNKEHHKDNNYVSMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKK
QLHHYLPAEILQKKKKQSLSDVNRSSGGLQSKRLSLDSSCLDSSRDTDNGTPFNSPASKSDSPSVGETER
NSAEPAAVIVEKPLSVPPAQGLSIPVIGAKVDSTVKTVSPPTVCTIPTVVGRNVIPRITTPHNPAQGQPH
LNGMSNITKTVTPKRSHSPSIDGTPKRLKDVEKFIRLESTFKDPRTAEERKRKSVDAIGGESMPIPTIDT
SRKKRLPSKELPDSSSPVPANNIRVIKNSIRLTLNR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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