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Report for CCDS17780.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
17780.1 Public Mus musculus 3 Olfm3 23 108 98 CCDS HistoryNCBI Gene:229759Re-query CCDS DB by CCDS ID:17780.1Re-query CCDS DB by GeneID:229759See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 17780.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000051309.8 ENSMUSP00000060985.8 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000051309.8Link to Ensembl Protein Viewer:ENSMUSP00000060985.8Re-query CCDS DB by Nucleotide ID:ENSMUST00000051309Re-query CCDS DB by Protein ID:ENSMUSP00000060985
Original member Current member NCBI NM_153157.3 NP_694797.1 Accepted alive Link to Nucleotide Sequence:NM_153157.3Link to Protein Sequence:NP_694797.1Re-query CCDS DB by Nucleotide ID:NM_153157Re-query CCDS DB by Protein ID:NP_694797Link to BLAST:NP_694797.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_694797.1 478 P63056 478 100% 0 0

Chromosomal Locations for CCDS 17780.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 3 (NC_000069.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 115081057 115081185 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 115090081 115090227 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 115096876 115097031 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 115101804 115102023 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 115120894 115121000 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 115122180 115122857 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1437 nt):
ATGAGTGCTCCACTGCTGAAACTGGGCGCTGTGCTCAGTACCATGGCAATGATCTCAAACTGGATGTCCC
AAACTCTCCCATCCCTGGTAGGACTGAACACCACAAGGCTGTCGGCGCCAGATACCCTAACTCAGATTAG
CCCCAAAGAAGGGTGGCAAGTGTACAGCTCAGCACAGGACCCTGATGGGCGATGCATTTGTACTGTGGTT
GCTCCAGAACAAAACCTGTGTTCCAGAGATGCCAAAAGCAGGCAGCTTCGCCAGCTACTGGAAAAGGTAC
AGAATATGTCACAGTCTATAGAAGTCTTAAACTTGAGAACTCAGAGAGATTTTCAGTATGTCTTAAAAAT
GGAAACCCAAATGAAAGGGCTGAAGGCCAAGTTTCGGCAGATTGAAGATGATCGGAAGACGCTAATGACC
AAGCATTTTCAAGAGTTGAAAGAGAAAATGGATGAGCTACTGCCCCTGATCCCAGTGTTGGAGCAGTACA
AAACCGATGCAAAGCTCATCACACAGTTCAAGGAAGAAATTCGGAACCTGTCTTCAGTCCTCACTGGGAT
TCAGGAGGAAATTGGTGCCTATGACTATGAAGAACTTCATCAACGGGTCCTCAGCTTAGAGACCAGGCTT
CGTGACTGCATGAAAAAGCTAACATGTGGCAAATTGATGAAAATCACAGGCCCCATCACAGTCAAGACAT
CTGGAACTCGATTTGGTGCTTGGATGACGGATCCTTTAGCATCTGAAAAGAATAACAGAGTCTGGTATAT
GGACAGTTATACCAACAATAAAATAGTTCGTGAATACAAGTCCATTGCAGACTTTGTGAGTGGAGCTGAA
TCAAGGACATACAACCTCCCTTTCAAGTGGGCAGGAACTAACCATGTTGTCTACAATGGCTCTCTCTATT
TTAACAAATATCAGAGTAATATCATCATCAAGTACAGCTTTGACTTAGGGAGAGTGCTAGCCCAAAGAAG
CCTGGAGTACGCTGGTTTTCACAATGTGTACCCCTATACATGGGGTGGATTCTCTGACATTGACCTAATG
GCTGATGAAATTGGTCTGTGGGCTGTATATGCAACTAACCAGAATGCAGGCAATATTGTCATCAGCCAGC
TTAATCAAGATACCTTGGAGGTGATGAAAAGCTGGAGCACTGGCTATCCCAAGAGAAGTGCAGGGGAATC
CTTCATGATCTGTGGGACTCTGTACGTCACCAATTCCCACTTAACAGGAGCCAAAGTGTATTATTCCTAT
TCCACAAAAACTTCCACATATGAGTACACGGACATCCCCTTCCATAACCAATACTTTCACATATCTATGC
TTGACTACAATGCAAGAGATAGAGCTCTTTATGCCTGGAACAATGGCCACCAGGTCCTGTTCAATGTTAC
CCTGTTCCACATCATTAAGACTGAAGATGACACATAG

Translation (478 aa):
MSAPLLKLGAVLSTMAMISNWMSQTLPSLVGLNTTRLSAPDTLTQISPKEGWQVYSSAQDPDGRCICTVV
APEQNLCSRDAKSRQLRQLLEKVQNMSQSIEVLNLRTQRDFQYVLKMETQMKGLKAKFRQIEDDRKTLMT
KHFQELKEKMDELLPLIPVLEQYKTDAKLITQFKEEIRNLSSVLTGIQEEIGAYDYEELHQRVLSLETRL
RDCMKKLTCGKLMKITGPITVKTSGTRFGAWMTDPLASEKNNRVWYMDSYTNNKIVREYKSIADFVSGAE
SRTYNLPFKWAGTNHVVYNGSLYFNKYQSNIIIKYSFDLGRVLAQRSLEYAGFHNVYPYTWGGFSDIDLM
ADEIGLWAVYATNQNAGNIVISQLNQDTLEVMKSWSTGYPKRSAGESFMICGTLYVTNSHLTGAKVYYSY
STKTSTYEYTDIPFHNQYFHISMLDYNARDRALYAWNNGHQVLFNVTLFHIIKTEDDT


Links Key
 Links to:   History report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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