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Report for CCDS17751.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
17751.1 Public Mus musculus 3 Gnai3 23 108 98 CCDS HistoryNCBI Gene:14679Re-query CCDS DB by CCDS ID:17751.1Re-query CCDS DB by GeneID:14679See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 17751.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000000001.4 ENSMUSP00000000001.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000000001.4Link to Ensembl Protein Viewer:ENSMUSP00000000001.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000000001Re-query CCDS DB by Protein ID:ENSMUSP00000000001
Original member Current member NCBI NM_010306.3 NP_034436.1 Accepted alive Link to Nucleotide Sequence:NM_010306.3Link to Protein Sequence:NP_034436.1Re-query CCDS DB by Nucleotide ID:NM_010306Re-query CCDS DB by Protein ID:NP_034436Link to BLAST:NP_034436.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_034436.1 354 Q9DC51 354 100% 0 0

Chromosomal Locations for CCDS 17751.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 3 (NC_000069.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 108109422 108109612 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 108111935 108112088 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 108112473 108112602 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 108115763 108115891 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 108118301 108118458 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 108123542 108123683 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 108123795 108123837 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 108145888 108146005 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1065 nt):
ATGGGCTGCACGTTGAGCGCCGAGGACAAGGCGGCGGTGGAGCGGAGCAAGATGATCGACCGCAACTTGC
GGGAGGACGGGGAGAAAGCGGCCAAAGAAGTGAAGCTGCTGCTGCTCGGCGCTGGAGAATCTGGTAAAAG
TACCATCGTGAAACAGATGAAAATCATTCATGAGGACGGCTATTCAGAGGACGAATGTAAACAGTATAAA
GTAGTTGTCTACAGCAATACTATTCAGTCCATCATTGCAATCATACGAGCCATGGGACGGTTGAAGATTG
ATTTTGGGGAATCTGCCAGAGCAGATGATGCCCGACAGTTATTTGTTTTAGCTGGGAGTGCTGAAGAAGG
AGTCATGACTTCAGAACTAGCAGGCGTGATTAAACGTTTATGGCGAGATGGCGGGGTACAGGCATGCTTT
AGCAGGTCCAGGGAATATCAGCTCAATGATTCTGCTTCATACTACCTAAATGATTTGGATAGAATATCCC
AGACCAACTACATTCCAACTCAGCAAGATGTTCTTCGGACAAGAGTGAAGACTACAGGCATTGTGGAGAC
CCACTTCACCTTCAAGGAACTCTACTTCAAAATGTTTGATGTAGGTGGCCAAAGATCCGAACGAAAAAAG
TGGATTCACTGTTTTGAGGGAGTGACAGCAATTATCTTTTGTGTGGCTCTCAGTGATTACGACCTTGTTC
TGGCTGAGGATGAGGAAATGAACCGAATGCATGAAAGCATGAAATTGTTTGACAGCATTTGTAACAACAA
ATGGTTTACAGACACTTCAATCATTCTCTTTCTTAATAAGAAAGACCTTTTTGAGGAAAAAATAAAGAGG
AGTCCATTAACAATCTGTTATCCAGAATACACAGGTTCCAATACATACGAAGAGGCAGCTGCTTACATTC
AGTGCCAGTTTGAAGATCTGAACCGAAGAAAAGATACCAAGGAGGTCTACACTCACTTCACCTGTGCCAC
AGACACCAAAAATGTGCAGTTTGTTTTTGATGCTGTTACGGATGTCATCATTAAAAACAACTTAAAGGAA
TGTGGGCTTTATTGA

Translation (354 aa):
MGCTLSAEDKAAVERSKMIDRNLREDGEKAAKEVKLLLLGAGESGKSTIVKQMKIIHEDGYSEDECKQYK
VVVYSNTIQSIIAIIRAMGRLKIDFGESARADDARQLFVLAGSAEEGVMTSELAGVIKRLWRDGGVQACF
SRSREYQLNDSASYYLNDLDRISQTNYIPTQQDVLRTRVKTTGIVETHFTFKELYFKMFDVGGQRSERKK
WIHCFEGVTAIIFCVALSDYDLVLAEDEEMNRMHESMKLFDSICNNKWFTDTSIILFLNKKDLFEEKIKR
SPLTICYPEYTGSNTYEEAAAYIQCQFEDLNRRKDTKEVYTHFTCATDTKNVQFVFDAVTDVIIKNNLKE
CGLY


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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