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Report for CCDS17494.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
17494.2 Reviewed, update pending Mus musculus 3 Mtx1 23 108 98 CCDS HistoryNCBI Gene:17827Re-query CCDS DB by CCDS ID:17494.2Re-query CCDS DB by GeneID:17827See the combined annotation on chromosome 3 in Sequence Viewer

Public Note for CCDS 17494.2
The coding region has been updated to extend the N-terminus to one that is supported by available conservation data. The use of an alternative upstream start codon would result in a protein that is 144 aa longer at the N-terminal and includes a predicted mitochondrial transit peptide (aa 1-92; by MITOPROT).

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Sequence IDs included in CCDS 17494.2

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000073572.10 ENSMUSP00000073261.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000073572.10Link to Ensembl Protein Viewer:ENSMUSP00000073261.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000073572Re-query CCDS DB by Protein ID:ENSMUSP00000073261
Original member Current member NCBI NM_013604.3 NP_038632.3 Pending alive Link to Nucleotide Sequence:NM_013604.3Link to Protein Sequence:NP_038632.3Re-query CCDS DB by Nucleotide ID:NM_013604Re-query CCDS DB by Protein ID:NP_038632Link to BLAST:NP_038632.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_038632.3 317 P47802 317 99.6845% 0 1

Chromosomal Locations for CCDS 17494.2


Notice: Due to asynchronous updates in annotation, the current annotation is not yet consistent.


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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