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Report for CCDS17205.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
17205.1 Public Mus musculus 2 Fndc11 23 108 98 CCDS HistoryNCBI Gene:332713Re-query CCDS DB by CCDS ID:17205.1Re-query CCDS DB by GeneID:332713See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 17205.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000050026.6 ENSMUSP00000056320.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000050026.6Link to Ensembl Protein Viewer:ENSMUSP00000056320.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000050026Re-query CCDS DB by Protein ID:ENSMUSP00000056320
Original member NCBI NM_199312.4 NP_955016.1 Updated not alive Link to Nucleotide Sequence:NM_199312.4Link to Protein Sequence:NP_955016.1Re-query CCDS DB by Nucleotide ID:NM_199312Re-query CCDS DB by Protein ID:NP_955016
Current member NCBI NM_199312.5 NP_955016.1 Accepted alive Link to Nucleotide Sequence:NM_199312.5Link to Protein Sequence:NP_955016.1Re-query CCDS DB by Nucleotide ID:NM_199312Re-query CCDS DB by Protein ID:NP_955016Link to BLAST:NP_955016.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_955016.1 326 Q80WB0 326 100% 0 0

Chromosomal Locations for CCDS 17205.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 2 (NC_000068.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 181221404 181222361 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 181222558 181222580 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (981 nt):
ATGAACTTCCAGGTGACAGGCCTGGCCCTGGACAAAATGAAGCTGGACAGTCCACATTCCTTCCTGGACG
CAGAGGAGGTGGAGGAGGCAGAGGACCAGCAGCTGCTGGAGCCAGAGGCTTGGAGGACATACATGGAGCG
CCGCAACGTGCTGCGTGAGTTCCTGACCACAGACCTGAGCCCCCAGTTGCTCAAGCGCCACCATGCCCGC
ATGCAGCTGCTCAAGAAGTGCTCCTACTACATTGAGATTCTCCCTAAGCACCTGGCCCTGGGTGACCAGA
ACCCGCTGGTGCTACCTAACACCATGTTCCAGCTCATTGATCCCTGGAAGTTCCAGCGCATGAAGAAGGT
GGGCACAGCACAGACCAAGATCCAGCTCCTCCTGCTTGGGGACCTGCTGGAGCAGCTGGACCATGGCCGG
GCAGCACTGGATGCCCTACTTGAGGCCCCTGACCCACGGCCCTTCCTGGCAGGCTGGGGGCTTGTGGAAC
AGCAGTTGGCAGACCTATCAGTTGTCATGGACAACTTCCTGGCCATGATGGTACCAGGACACCTGCATGT
CAAGCACCGCCTGGTATCTGACATTGGAGCCACCAAAATCCCACACATCCGGCTTATGCTGAGCACGAAG
ATGCCAGTTATGTTCGACCGGAAGGAGTCAGTGGCGCATCAGGACTGGGTCAGCCTGCGCTGGTTTGTAA
CCATCCAGCCGGCAGCACCAGAGCAGTATGAACTGCGCTTCAAGCTGTTGGAGCCCAGGACACAACAGGA
GTGTACACAGTGTGGCATAGTCCCTGTGGCTGCCTGCACCTTTGATGTCCACAACCTGTTGCCCAACCGT
ACCTACAAGTTCACTATCAAGAGGGCAGAAAGCTACACCCTGGTCTATGAGCCCTGGCGGGACAGCCTCA
CCTTGCAGACCACGCCAGGACCCCCTGAGGGGCCTGCCCCCAGGCTGGGAGAGCCCCCGGCTGGACTCTA
G

Translation (326 aa):
MNFQVTGLALDKMKLDSPHSFLDAEEVEEAEDQQLLEPEAWRTYMERRNVLREFLTTDLSPQLLKRHHAR
MQLLKKCSYYIEILPKHLALGDQNPLVLPNTMFQLIDPWKFQRMKKVGTAQTKIQLLLLGDLLEQLDHGR
AALDALLEAPDPRPFLAGWGLVEQQLADLSVVMDNFLAMMVPGHLHVKHRLVSDIGATKIPHIRLMLSTK
MPVMFDRKESVAHQDWVSLRWFVTIQPAAPEQYELRFKLLEPRTQQECTQCGIVPVAACTFDVHNLLPNR
TYKFTIKRAESYTLVYEPWRDSLTLQTTPGPPEGPAPRLGEPPAGL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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