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Report for CCDS17184.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
17184.1 Public Mus musculus 2 Dido1 23 108 98 CCDS HistoryNCBI Gene:23856Re-query CCDS DB by CCDS ID:17184.1Re-query CCDS DB by GeneID:23856See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 17184.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000103055.7 ENSMUSP00000099344.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000103055.7Link to Ensembl Protein Viewer:ENSMUSP00000099344.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000103055Re-query CCDS DB by Protein ID:ENSMUSP00000099344
Original member Current member EBI ENSMUST00000130986.7 ENSMUSP00000119689.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000130986.7Link to Ensembl Protein Viewer:ENSMUSP00000119689.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000130986Re-query CCDS DB by Protein ID:ENSMUSP00000119689
Original member NCBI NM_001291432.1 NP_001278361.1 Updated not alive Link to Nucleotide Sequence:NM_001291432.1Link to Protein Sequence:NP_001278361.1Re-query CCDS DB by Nucleotide ID:NM_001291432Re-query CCDS DB by Protein ID:NP_001278361
Current member NCBI NM_001291432.2 NP_001278361.1 Accepted alive Link to Nucleotide Sequence:NM_001291432.2Link to Protein Sequence:NP_001278361.1Re-query CCDS DB by Nucleotide ID:NM_001291432Re-query CCDS DB by Protein ID:NP_001278361Link to BLAST:NP_001278361.1
Original member NCBI NM_011805.3 NP_035935.2 Updated not alive Link to Nucleotide Sequence:NM_011805.3Link to Protein Sequence:NP_035935.2Re-query CCDS DB by Nucleotide ID:NM_011805Re-query CCDS DB by Protein ID:NP_035935
Current member NCBI NM_011805.4 NP_035935.2 Accepted alive Link to Nucleotide Sequence:NM_011805.4Link to Protein Sequence:NP_035935.2Re-query CCDS DB by Nucleotide ID:NM_011805Re-query CCDS DB by Protein ID:NP_035935Link to BLAST:NP_035935.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001278361.1 614 Q8C9B9-2 614 100% 0 0
NP_035935.2 614 Q8C9B9-2 614 100% 0 0

Chromosomal Locations for CCDS 17184.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 2 (NC_000068.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 180683549 180684028 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 180684964 180685176 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 180687476 180687797 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 180688824 180689653 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1845 nt):
ATGGATGATAAAGGGCACCTGAGCAATGAGGAAGCACCCAAGGCTATCAAACCCACCAGTAAGGAGTTCA
GGAAAACCTGGGGTTTTCGAAGAACCACGATTGCCAAACGTGAGGGTGCAGGAGACACGGAGGTGGACCC
CAGTGAGCAGCAACCACAGCAGCATAACCTCTCCCTGCGCCGCAGTGGACGGCAACCAAAACGTACTGAG
AGGGTAGAAGAGTTTCTTACCACGGTTCGGCGCCGAGGGAAAAAGAATGTGCCGGTGTCCCTGGAGGATT
CCAGTGAGCCCACATCTTCCACAGTCACTGATGTGGAGACAGCTTCCGAGGGGAGCGTTGAAAGCAGTTC
TGAGATCAGAAGTGGCCCTGTATCTGACTCCTTAGGGAAAGAACATCCTGCCTCTTCTGAAAAGGCAAAA
GGAGGTGAAGAGGAAGAAGACACCTCTGACAGTGACAGTGATGGCCTTACGTTGAAGGAACTTCAGAACC
GCCTTCGGAGAAAGCGAGAGCAAGAACCTGTGGAGAGGTCCCTGAGAGGCAGTCAGAATCGCCTGAGGAA
GAAGCGCAGAGAGGAAGATTCTGCCGAAACTGGGAGTGTCCAAATAGGCAGTGCCGAGCAGGACAGACCT
CTCTGTAAGCAGGAGCCTGAGGCTAGTCAGGGACCAGTGTCCCAGTCAGAGACAGATGACATAGAAAATC
AGTTGGAAGGGAAGGCGACTCAGGGAAATACAGAGGAAAACCCCAGGGAAGCGGGCAAACCAAAGCCTGA
GTGTGAGGTTTACGACCCCAATGCCCTGTACTGCATCTGCCGCCAGCCTCACAACAACAGGTTTATGATC
TGCTGTGATCGGTGTGAGGAGTGGTTCCATGGTGACTGTGTGGGTATTTCTGAGGCCCGAGGGCGGCTCC
TGGAAAGGAACGGGGAAGACTACATCTGCCCAAATTGCACCATTTTGCAAGTGCAGGATGAGACAAACGG
TAGCGCCACCGATGAGCAGGACTCTGGGTGCAGATCTGTGGGTGCTGATGGCACAGACTGCACAAGCATA
GGGACAGTAGAGCAGAAGTCCGGAGAAGACCAGGGCATAAAGGGTAGGATTGAGAAGGCAGCAAACCCCA
GCGGCAAGAAAAAACTCAAGATATTCCAGCCTGTCGTAGAGGCTCCTGGTGCTCCTAAATGCATTGGCCC
TGGGTGTTCCAGTGTAGCACAGCCTGACTCTGTGTATTGCAGTAATGACTGCATTCTCAAACACGCAGCA
GCTACCATGAGATTTCTAAGTTCAGGTAAAGAACAAAAAACAAAACCCAAGGAAAAGGTCAAGACGAAGC
CAGAAAAGTTCAGTCTTCCAAAATGCAGTGTTCAGGTGGGGATTAAAATCTCTTCTGTGCACAAGAGACT
AGCGTCAGAGAAAAGGGAAAACCCAGTGAAGAAAGTGATGCTGGCTTCCAGGAGTGAGACTTCTGGGAAG
GAGGCAGCCTGTGAGAGCAGCACACCATCCTGGGCAAGTGACCACAACTACAATGCTGTGAAGCCAGAGA
AGCCAGAGAAGCCCACTGCACTCTCGCCCACCCTATTGAGTAAATGTACGTATCACCCAAAGGCTGGCTT
CCCAGGCCCCTCCCATCATCTGGGTGGCTGCCTGGGGCTGTCTAGGACCAGAGTCCTGGGTGTTCTGGTG
CTGATAGTAGCCAGCAGCTCACTGCCAGCCAGAAGCAGATACCAAGATGCCTCTGGACCCCAGGTGTTCC
TGCCTAGCCTGTGGAGCCTCTCTGGGTGGTTCCTAAAGAGCTGTGTAGGCCTCATGTTGGAGGCAATTTC
TTATTTCAGTTTTAGGCCTTGGTAA

Translation (614 aa):
MDDKGHLSNEEAPKAIKPTSKEFRKTWGFRRTTIAKREGAGDTEVDPSEQQPQQHNLSLRRSGRQPKRTE
RVEEFLTTVRRRGKKNVPVSLEDSSEPTSSTVTDVETASEGSVESSSEIRSGPVSDSLGKEHPASSEKAK
GGEEEEDTSDSDSDGLTLKELQNRLRRKREQEPVERSLRGSQNRLRKKRREEDSAETGSVQIGSAEQDRP
LCKQEPEASQGPVSQSETDDIENQLEGKATQGNTEENPREAGKPKPECEVYDPNALYCICRQPHNNRFMI
CCDRCEEWFHGDCVGISEARGRLLERNGEDYICPNCTILQVQDETNGSATDEQDSGCRSVGADGTDCTSI
GTVEQKSGEDQGIKGRIEKAANPSGKKKLKIFQPVVEAPGAPKCIGPGCSSVAQPDSVYCSNDCILKHAA
ATMRFLSSGKEQKTKPKEKVKTKPEKFSLPKCSVQVGIKISSVHKRLASEKRENPVKKVMLASRSETSGK
EAACESSTPSWASDHNYNAVKPEKPEKPTALSPTLLSKCTYHPKAGFPGPSHHLGGCLGLSRTRVLGVLV
LIVASSSLPARSRYQDASGPQVFLPSLWSLSGWFLKSCVGLMLEAISYFSFRPW


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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