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Report for CCDS17183.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
17183.1 Public Mus musculus 2 Dido1 23 108 98 CCDS HistoryNCBI Gene:23856Re-query CCDS DB by CCDS ID:17183.1Re-query CCDS DB by GeneID:23856See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 17183.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000103056.9 ENSMUSP00000099345.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000103056.9Link to Ensembl Protein Viewer:ENSMUSP00000099345.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000103056Re-query CCDS DB by Protein ID:ENSMUSP00000099345
Original member Current member EBI ENSMUST00000103057.7 ENSMUSP00000099346.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000103057.7Link to Ensembl Protein Viewer:ENSMUSP00000099346.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000103057Re-query CCDS DB by Protein ID:ENSMUSP00000099346
Original member NCBI NM_001291433.1 NP_001278362.1 Updated not alive Link to Nucleotide Sequence:NM_001291433.1Link to Protein Sequence:NP_001278362.1Re-query CCDS DB by Nucleotide ID:NM_001291433Re-query CCDS DB by Protein ID:NP_001278362
Current member NCBI NM_001291433.2 NP_001278362.1 Accepted alive Link to Nucleotide Sequence:NM_001291433.2Link to Protein Sequence:NP_001278362.1Re-query CCDS DB by Nucleotide ID:NM_001291433Re-query CCDS DB by Protein ID:NP_001278362Link to BLAST:NP_001278362.1
Original member NCBI NM_177852.4 NP_808520.2 Updated not alive Link to Nucleotide Sequence:NM_177852.4Link to Protein Sequence:NP_808520.2Re-query CCDS DB by Nucleotide ID:NM_177852Re-query CCDS DB by Protein ID:NP_808520
Current member NCBI NM_177852.5 NP_808520.2 Accepted alive Link to Nucleotide Sequence:NM_177852.5Link to Protein Sequence:NP_808520.2Re-query CCDS DB by Nucleotide ID:NM_177852Re-query CCDS DB by Protein ID:NP_808520Link to BLAST:NP_808520.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001278362.1 1183 Q8C9B9-3 1183 100% 0 0
NP_808520.2 1183 Q8C9B9-3 1183 100% 0 0

Chromosomal Locations for CCDS 17183.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 2 (NC_000068.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 180669365 180669586 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 180670265 180670354 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 180670861 180671014 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 180671392 180671914 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 180672283 180672418 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 180673231 180673335 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 180673475 180673591 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 180674691 180674850 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 180674968 180675427 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 180683809 180684028 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 180684964 180685176 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 180687476 180687797 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 180688824 180689653 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3552 nt):
ATGGATGATAAAGGGCACCTGAGCAATGAGGAAGCACCCAAGGCTATCAAACCCACCAGTAAGGAGTTCA
GGAAAACCTGGGGTTTTCGAAGAACCACGATTGCCAAACGTGAGGGTGCAGGAGACACGGAGGTGGACCC
CAGTGAGCAGCAACCACAGCAGCATAACCTCTCCCTGCGCCGCAGTGGACGGCAACCAAAACGTACTGAG
AGGGTAGAAGAGTTTCTTACCACGGTTCGGCGCCGAGGGAAAAAGAATGTGCCGGTGTCCCTGGAGGATT
CCAGTGAGCCCACATCTTCCACAGTCACTGATGTGGAGACAGCTTCCGAGGGGAGCGTTGAAAGCAGTTC
TGAGATCAGAAGTGGCCCTGTATCTGACTCCTTAGGGAAAGAACATCCTGCCTCTTCTGAAAAGGCAAAA
GGAGGTGAAGAGGAAGAAGACACCTCTGACAGTGACAGTGATGGCCTTACGTTGAAGGAACTTCAGAACC
GCCTTCGGAGAAAGCGAGAGCAAGAACCTGTGGAGAGGTCCCTGAGAGGCAGTCAGAATCGCCTGAGGAA
GAAGCGCAGAGAGGAAGATTCTGCCGAAACTGGGAGTGTCCAAATAGGCAGTGCCGAGCAGGACAGACCT
CTCTGTAAGCAGGAGCCTGAGGCTAGTCAGGGACCAGTGTCCCAGTCAGAGACAGATGACATAGAAAATC
AGTTGGAAGGGAAGGCGACTCAGGGAAATACAGAGGAAAACCCCAGGGAAGCGGGCAAACCAAAGCCTGA
GTGTGAGGTTTACGACCCCAATGCCCTGTACTGCATCTGCCGCCAGCCTCACAACAACAGGTTTATGATC
TGCTGTGATCGGTGTGAGGAGTGGTTCCATGGTGACTGTGTGGGTATTTCTGAGGCCCGAGGGCGGCTCC
TGGAAAGGAACGGGGAAGACTACATCTGCCCAAATTGCACCATTTTGCAAGTGCAGGATGAGACAAACGG
TAGCGCCACCGATGAGCAGGACTCTGGGTGCAGATCTGTGGGTGCTGATGGCACAGACTGCACAAGCATA
GGGACAGTAGAGCAGAAGTCCGGAGAAGACCAGGGCATAAAGGGTAGGATTGAGAAGGCAGCAAACCCCA
GCGGCAAGAAAAAACTCAAGATATTCCAGCCTGTCGTAGAGGCTCCTGGTGCTCCTAAATGCATTGGCCC
TGGGTGTTCCAGTGTAGCACAGCCTGACTCTGTGTATTGCAGTAATGACTGCATTCTCAAACACGCAGCA
GCTACCATGAGATTTCTAAGTTCAGGTAAAGAACAAAAAACAAAACCCAAGGAAAAGGTCAAGACGAAGC
CAGAAAAGTTCAGTCTTCCAAAATGCAGTGTTCAGGTGGGGATTAAAATCTCTTCTGTGCACAAGAGACT
AGCGTCAGAGAAAAGGGAAAACCCAGTGAAGAAAGTGATGCTGGCTTCCAGGAGTGAGACTTCTGGGAAG
GAGGCAGCCTGTGAGAGCAGCACACCATCCTGGGCAAGTGACCACAACTACAATGCTGTGAAGCCAGAGA
AGCCAGAGAAGCCCACTGCACTCTCGCCCACCCTATTGAGTAAATCCATGAAGGATGACAGGAGGGTGGA
GGACAGGACAATGGCAGCAGTTACCATCCCGAAGAAAGCACTTCCTTCAGCCTCTTTGGTGGGCAGACAG
ACTTCACCTAGGAATCTTGTTCCAAAGAAGCTTCCTCCTTACTCTAATATGGCAGGAGCCAAACCAGCCA
TTAAGAAACTGCCTTCAGGCTTCAAGGGTACCATCCCCAAGAGGCCATGGCCCTCAGCCACCCTGTCAGG
CACTTCTGCCAGGCAGGCAGGACCAACACCTATGACAGCTGCTTCCAAAAAGTTGCCTGGCTCTGCTGCT
GTGGTGGGAGTTACCAGGAAGCCAATGTCTGCCAATGTTCCTGCTGCTTCTCCAGCCCCAGGACGGCTTG
GTCCTGTGAGCCCAGCTCCATCACAGCCCAATTCACAAATTCGACAAAATATAAGGCGCTCCTTGAAAGA
GATTTTGTGGAAAAGAGTCAATGACAGCGATGACTTAATAATGACAGAAAATGAAGTAGGAAAAATTGCC
CTCCACATTGAGAAGGAGATGTTTAACTTGTTCCAGGTTACTGATAATCGCTATAAGAGCAAATATCGCA
GCATCATGTTCAACCTTAAGGATCCTAAGAATCAGGGGCTCTTCCATCGTGTTCTTCGAGAAGAAATCTC
CTTGGCAAAACTTGTCAGAATGAAGCCTGAAGAACTTGTATCTAAAGAGCTTTCTATGTGGACAGAGAAG
CCCACAAAATCTGTGATAGAATCCAGGACTAAGTTGCTTAATGAAAGCAAGAAGAACACTACTAAACCAG
AAACCATTCCTGACATGGAAGATTCTCCACCGGTATCAGATTCAGAAGAACAACAAGAGTCAGTGCGAGC
CGCCCCTGAGAAGAGCGCAGCACCTCTCCTGGACGTCTTCAGCAGCATGCTGAAGGACACCACAAGCCAG
CACCGTGCCCATCTTTTTGATTTAAACTGTAAAATCTGTACAGGTCAGGTTCCATCCTCGGAGGATGAAC
CAGCTCCTAAGAAGCAAAAGCTTTCAGCTTCTTCTAAGAAGGAAGACTTTAAGCCCAGGCATGACAGCTC
TCCACCTAATGCAGTTCCTAACACTGCTGATGAAGGGATTGCAGACACGCTGCCTGAAAATGCCTCTGAG
CCAGACCCGGAGAGTACATCTAGTCTTAACCAGGAGAGAAAGTGTTTCCCTGAGTCTCCAGGCGATAGCC
ATCCTGAGCCCTCGTCTCTGGGTGGCCTTTCTCCCTCTTCTGCCTCTGGTGGGAGTGGGGTGGTCACCAC
AGTCACCATGTCTGGTCGAGACCCCAGAACTGCCCTGAGTGGGTCGTGCACAGTCACAGCCTCCATGGCA
GCCCATCTGGACAACTCCCAGGCTTCAGAAACCAAACTGGACATGATAAAGCCTGCATTGACTTCTGCAG
TGGTGCCCAAGTCCATACTGGCTAAGCCATCCTCCTCTCCTGACCCGAGATACCTGTCAGTACCACCATC
ACCAAGCATTTCAGAATCACGATCCCCACCAGAAGGAGATACAACCCTCTTTTTGTCTCGACTCAACACG
ATTTGGAAAGGATTTATTAATATGCAGAGTGTAGCAAAATTTGTCACTAAGGCATATCCTGTCTCTGGGT
GTTTGGATTATCTCAGTGAGGATTTGCCAGACACCATCCACATCGGTGGAAGGATTGCTCCAAAGACCGT
GTGGGATTACGTTGGCAAACTCAAGTCATCGGTGTCCAAGGAGCTCTGTCTGATCCGCTTCCACCCTGCC
ACTGAGGAGGAGGAGGTTGCATACATTTCTCTCTACTCCTATTTTAGCAGCCGTGGTCGCTTTGGGGTTG
TAGCTAATAACAACAGGCATGTCAAGGACCTGTACCTGATTCCACTGAGTGCTAAGGACCCTGTGCCATC
CAAACTCTTGCCCTTTGAGGGCCCAGGTAAGCACCCAGTTTCTGGGAGGTGA

Translation (1183 aa):
MDDKGHLSNEEAPKAIKPTSKEFRKTWGFRRTTIAKREGAGDTEVDPSEQQPQQHNLSLRRSGRQPKRTE
RVEEFLTTVRRRGKKNVPVSLEDSSEPTSSTVTDVETASEGSVESSSEIRSGPVSDSLGKEHPASSEKAK
GGEEEEDTSDSDSDGLTLKELQNRLRRKREQEPVERSLRGSQNRLRKKRREEDSAETGSVQIGSAEQDRP
LCKQEPEASQGPVSQSETDDIENQLEGKATQGNTEENPREAGKPKPECEVYDPNALYCICRQPHNNRFMI
CCDRCEEWFHGDCVGISEARGRLLERNGEDYICPNCTILQVQDETNGSATDEQDSGCRSVGADGTDCTSI
GTVEQKSGEDQGIKGRIEKAANPSGKKKLKIFQPVVEAPGAPKCIGPGCSSVAQPDSVYCSNDCILKHAA
ATMRFLSSGKEQKTKPKEKVKTKPEKFSLPKCSVQVGIKISSVHKRLASEKRENPVKKVMLASRSETSGK
EAACESSTPSWASDHNYNAVKPEKPEKPTALSPTLLSKSMKDDRRVEDRTMAAVTIPKKALPSASLVGRQ
TSPRNLVPKKLPPYSNMAGAKPAIKKLPSGFKGTIPKRPWPSATLSGTSARQAGPTPMTAASKKLPGSAA
VVGVTRKPMSANVPAASPAPGRLGPVSPAPSQPNSQIRQNIRRSLKEILWKRVNDSDDLIMTENEVGKIA
LHIEKEMFNLFQVTDNRYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRMKPEELVSKELSMWTEK
PTKSVIESRTKLLNESKKNTTKPETIPDMEDSPPVSDSEEQQESVRAAPEKSAAPLLDVFSSMLKDTTSQ
HRAHLFDLNCKICTGQVPSSEDEPAPKKQKLSASSKKEDFKPRHDSSPPNAVPNTADEGIADTLPENASE
PDPESTSSLNQERKCFPESPGDSHPEPSSLGGLSPSSASGGSGVVTTVTMSGRDPRTALSGSCTVTASMA
AHLDNSQASETKLDMIKPALTSAVVPKSILAKPSSSPDPRYLSVPPSPSISESRSPPEGDTTLFLSRLNT
IWKGFINMQSVAKFVTKAYPVSGCLDYLSEDLPDTIHIGGRIAPKTVWDYVGKLKSSVSKELCLIRFHPA
TEEEEVAYISLYSYFSSRGRFGVVANNNRHVKDLYLIPLSAKDPVPSKLLPFEGPGKHPVSGR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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