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Report for CCDS16701.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
16701.2 Reviewed, update pending Mus musculus 2 Adra2b 23 108 98 CCDS HistoryNCBI Gene:11552Re-query CCDS DB by CCDS ID:16701.2Re-query CCDS DB by GeneID:11552See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)


Attributes
CDS uses downstream AUG

Sequence IDs included in CCDS 16701.2

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000104934.1 ENSMUSP00000100539.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000104934.1Link to Ensembl Protein Viewer:ENSMUSP00000100539.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000104934Re-query CCDS DB by Protein ID:ENSMUSP00000100539
Original member Current member NCBI NM_009633.4 NP_033763.3 Pending alive Link to Nucleotide Sequence:NM_009633.4Link to Protein Sequence:NP_033763.3Re-query CCDS DB by Nucleotide ID:NM_009633Re-query CCDS DB by Protein ID:NP_033763Link to BLAST:NP_033763.3

Chromosomal Locations for CCDS 16701.2

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 2 (NC_000068.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 127363580 127364926 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1347 nt):
ATGGTCCACCAGGAGCCCTACTCGGTGCAGGCCACCGCCGCCATCGCGTCGGCCATCACCTTTCTCATCC
TCTTCACCATTTTCGGCAATGCGCTGGTAATTCTGGCTGTGTTGACCAGCCGCTCTCTCCGTGCACCACA
AAACCTCTTCCTGGTGTCACTGGCAGCAGCCGACATCCTAGTGGCTACTCTTATCATCCCTTTCTCTCTG
GCCAACGAGCTGCTGGGCTATTGGTACTTCTGGCGTGCGTGGTGCGAGGTCTACCTGGCGCTAGACGTGC
TCTTCTGTACCTCCTCCATCGTGCACCTGTGTGCCATCAGTCTGGACAGATACTGGGCAGTGAGCCGAGC
ATTGGAGTACAACTCCAAGCGCACTCCACGCCGCATCAAATGCATCATCCTCACCGTGTGGCTCATTGCA
GCCGTCATTTCTCTACCGCCCCTCATCTACAAGGGCGACCAGCGCCCAGAGCCCCACGGGCTCCCCCAGT
GTGAGCTCAACCAAGAAGCCTGGTACATCTTGGCTTCCAGCATCGGATCTTTTTTTGCTCCCTGCCTCAT
CATGATTCTCGTCTACCTGCGAATCTATGTAATTGCCAAACGCAGCCACTGCAGAGGTCTCGGAGCTAAG
AGGGGCTCTGGGGAGGGTGAGTCCAAGAAGCCCCATCCGGCCGCCGGGGGAGTTCCAGCCTCGGCTAAAG
TGCCCACCCTGGTCTCTCCTCTATCTTCTGTCGGAGAGGCTAATGGACACCCCAAGCCTCCAAGGGAGAA
GGAGGAGGGGGAGACCCCTGAAGATCCCGAAGCCAGGGCTTTGCCACCCAATTGGTCTGCCCTGCCCAGA
TCAGTCCAGGACCAGAAGAAGGGGACTAGTGGGGCAACTGCAGAGAAGGGAGCTGAAGAGGATGAAGAGG
AGGTGGAAGAATGTGAACCCCAAACACTGCCAGCTTCTCCTGCCTCAGTATTCAACCCACCCTTGCAGCA
GCCTCAGACTTCCCGGGTGCTGGCCACGCTACGTGGCCAGGTGCTTCTGAGCAAGAATGTGGGTGTGGCC
AGTGGGCAGTGGTGGCGCCGTCGGACACAGCTGAGCCGAGAGAAGAGGTTCACCTTTGTGCTGGCGGTGG
TCATTGGTGTTTTTGTGGTCTGTTGGTTTCCTTTCTTCTTCAGCTACAGCCTGGGGGCCATCTGCCCACA
GCACTGCAAGGTACCCCATGGCCTCTTCCAGTTCTTCTTCTGGATTGGCTACTGCAACAGCTCTTTGAAT
CCTGTCATCTACACCATCTTCAACCAGGACTTCCGCCGTGCCTTTCGAAGGATCCTTTGCCGGCAGTGGA
CCCAGACTGGCTGGTGA

Translation (448 aa):
MVHQEPYSVQATAAIASAITFLILFTIFGNALVILAVLTSRSLRAPQNLFLVSLAAADILVATLIIPFSL
ANELLGYWYFWRAWCEVYLALDVLFCTSSIVHLCAISLDRYWAVSRALEYNSKRTPRRIKCIILTVWLIA
AVISLPPLIYKGDQRPEPHGLPQCELNQEAWYILASSIGSFFAPCLIMILVYLRIYVIAKRSHCRGLGAK
RGSGEGESKKPHPAAGGVPASAKVPTLVSPLSSVGEANGHPKPPREKEEGETPEDPEARALPPNWSALPR
SVQDQKKGTSGATAEKGAEEDEEEVEECEPQTLPASPASVFNPPLQQPQTSRVLATLRGQVLLSKNVGVA
SGQWWRRRTQLSREKRFTFVLAVVIGVFVVCWFPFFFSYSLGAICPQHCKVPHGLFQFFFWIGYCNSSLN
PVIYTIFNQDFRRAFRRILCRQWTQTGW


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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