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Report for CCDS1622.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
1622.1 Public Homo sapiens 1 ZBTB18 24 110 108 CCDS HistoryNCBI Gene:10472Re-query CCDS DB by CCDS ID:1622.1Re-query CCDS DB by GeneID:10472See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 1622.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000358704.4 ENSP00000351539.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000358704.4Link to Ensembl Protein Viewer:ENSP00000351539.4Re-query CCDS DB by Nucleotide ID:ENST00000358704Re-query CCDS DB by Protein ID:ENSP00000351539
Original member Current member NCBI NM_205768.3 NP_991331.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_205768.3Link to Protein Sequence:NP_991331.1Re-query CCDS DB by Nucleotide ID:NM_205768Re-query CCDS DB by Protein ID:NP_991331Link to BLAST:NP_991331.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_991331.1 531 Q99592-2 531 100% 0 0

Chromosomal Locations for CCDS 1622.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 244051432 244051444 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 244053788 244055370 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1596 nt):
ATGTGTCCTAAAGGTTATGAAGACAGTATGGAGTTTCCAGACCATAGTAGACATTTGCTACAGTGTCTGA
GC
GAGCAGAGACACCAGGGTTTTCTTTGTGACTGCACTGTTCTGGTGGGAGATGCCCAGTTCCGAGCGCA
C
CGAGCTGTACTGGCTTCATGCAGCATGTATTTCCACCTCTTTTACAAGGACCAGCTGGACAAAAGAGAC
ATT
GTTCATCTGAACAGCGACATTGTTACAGCCCCCGCTTTCGCTCTCCTGCTTGAATTCATGTATGAAG
GG
AAACTCCAGTTCAAAGACTTGCCCATTGAAGACGTGCTAGCAGCTGCCAGTTATCTCCACATGTATGA
C
ATTGTCAAAGTCTGCAAAAAGAAGCTGAAAGAGAAAGCCACCACGGAGGCAGACAGCACCAAAAAGGAA
GAA
GATGCTTCAAGTTGTTCGGACAAAGTCGAGAGTCTCTCCGATGGCAGCAGCCACATAGCAGGCGATT
TG
CCCAGTGATGAAGATGAAGGAGAAGATGAAAAATTGAACATCCTGCCCAGCAAAAGGGACTTGGCGGC
C
GAGCCTGGGAACATGTGGATGCGATTGCCCTCAGACTCAGCAGGCATCCCCCAGGCTGGCGGAGAGGCA
GAG
CCACACGCCACAGCAGCTGGAAAAACAGTAGCCAGCCCCTGCAGCTCAACAGAGTCTTTGTCCCAGA
GG
TCTGTCACCTCCGTGAGGGATTCGGCAGATGTTGACTGTGTGCTGGACCTGTCTGTCAAGTCCAGCCT
T
TCAGGAGTTGAAAATCTGAACAGCTCTTATTTCTCTTCACAGGACGTGCTGAGAAGCAACCTGGTGCAG
GTG
AAGGTGGAGAAAGAGGCTTCCTGTGATGAGAGTGATGTTGGCACTAATGACTATGACATGGAACATA
GC
ACTGTGAAAGAAAGTGTGAGCACTAATAACAGGGTACAGTATGAGCCGGCCCATCTGGCTCCCCTGAG
G
GAGGACTCGGTCTTGAGGGAGCTGGACCGGGAGGACAAAGCCAGTGATGATGAGATGATGACCCCAGAG
AGC
GAGCGTGTCCAGGTGGAGGGAGGCATGGAGAGCAGTCTGCTCCCCTACGTCTCCAACATCCTGAGCC
CC
GCGGGCCAGATCTTCATGTGCCCCCTGTGCAACAAGGTCTTCCCCAGCCCCCACATCCTGCAGATCCA
C
CTGAGCACGCACTTCCGCGAGCAGGACGGCATCCGCAGCAAGCCCGCCGCCGATGTCAACGTGCCCACG
TGC
TCGCTGTGTGGGAAGACTTTCTCTTGCATGTACACCCTCAAGCGCCACGAGAGGACTCACTCGGGGG
AG
AAGCCCTACACATGCACCCAGTGCGGCAAGAGCTTCCAGTACTCGCACAACCTGAGCCGCCATGCCGT
G
GTGCACACCCGCGAGAAGCCGCACGCCTGCAAGTGGTGCGAGCGCAGGTTCACGCAGTCCGGGGACCTG
TAC
AGACACATTCGCAAGTTCCACTGTGAGTTGGTGAACTCCTTGTCGGTCAAAAGCGAAGCACTGAGCT
TG
CCTACTGTCAGAGACTGGACCTTAGAAGATAGCTCTCAAGAACTTTGGAAATAA


Translation (531 aa):
MCPKGYEDSMEFPDHSRHLLQCLSEQRHQGFLCDCTVLVGDAQFRAHRAVLASCSMYFHLFYKDQLDKRD
I
VHLNSDIVTAPAFALLLEFMYEGKLQFKDLPIEDVLAAASYLHMYDIVKVCKKKLKEKATTEADSTKKE
E
DASSCSDKVESLSDGSSHIAGDLPSDEDEGEDEKLNILPSKRDLAAEPGNMWMRLPSDSAGIPQAGGEA
E
PHATAAGKTVASPCSSTESLSQRSVTSVRDSADVDCVLDLSVKSSLSGVENLNSSYFSSQDVLRSNLVQ
V
KVEKEASCDESDVGTNDYDMEHSTVKESVSTNNRVQYEPAHLAPLREDSVLRELDREDKASDDEMMTPE
S
ERVQVEGGMESSLLPYVSNILSPAGQIFMCPLCNKVFPSPHILQIHLSTHFREQDGIRSKPAADVNVPT
C
SLCGKTFSCMYTLKRHERTHSGEKPYTCTQCGKSFQYSHNLSRHAVVHTREKPHACKWCERRFTQSGDL
Y
RHIRKFHCELVNSLSVKSEALSLPTVRDWTLEDSSQELWK




Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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