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Report for CCDS1622.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
1622.1 Public Homo sapiens 1 ZBTB18 24 110 108 CCDS HistoryNCBI Gene:10472Re-query CCDS DB by CCDS ID:1622.1Re-query CCDS DB by GeneID:10472See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 1622.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000358704.4 ENSP00000351539.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000358704.4Link to Ensembl Protein Viewer:ENSP00000351539.4Re-query CCDS DB by Nucleotide ID:ENST00000358704Re-query CCDS DB by Protein ID:ENSP00000351539
Original member Current member NCBI NM_205768.3 NP_991331.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_205768.3Link to Protein Sequence:NP_991331.1Re-query CCDS DB by Nucleotide ID:NM_205768Re-query CCDS DB by Protein ID:NP_991331Link to BLAST:NP_991331.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_991331.1 531 Q99592-2 531 100% 0 0

Chromosomal Locations for CCDS 1622.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 244051432 244051444 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 244053788 244055370 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1596 nt):
ATGTGTCCTAAAGGTTATGAAGACAGTATGGAGTTTCCAGACCATAGTAGACATTTGCTACAGTGTCTGA
GCGAGCAGAGACACCAGGGTTTTCTTTGTGACTGCACTGTTCTGGTGGGAGATGCCCAGTTCCGAGCGCA
CCGAGCTGTACTGGCTTCATGCAGCATGTATTTCCACCTCTTTTACAAGGACCAGCTGGACAAAAGAGAC
ATTGTTCATCTGAACAGCGACATTGTTACAGCCCCCGCTTTCGCTCTCCTGCTTGAATTCATGTATGAAG
GGAAACTCCAGTTCAAAGACTTGCCCATTGAAGACGTGCTAGCAGCTGCCAGTTATCTCCACATGTATGA
CATTGTCAAAGTCTGCAAAAAGAAGCTGAAAGAGAAAGCCACCACGGAGGCAGACAGCACCAAAAAGGAA
GAAGATGCTTCAAGTTGTTCGGACAAAGTCGAGAGTCTCTCCGATGGCAGCAGCCACATAGCAGGCGATT
TGCCCAGTGATGAAGATGAAGGAGAAGATGAAAAATTGAACATCCTGCCCAGCAAAAGGGACTTGGCGGC
CGAGCCTGGGAACATGTGGATGCGATTGCCCTCAGACTCAGCAGGCATCCCCCAGGCTGGCGGAGAGGCA
GAGCCACACGCCACAGCAGCTGGAAAAACAGTAGCCAGCCCCTGCAGCTCAACAGAGTCTTTGTCCCAGA
GGTCTGTCACCTCCGTGAGGGATTCGGCAGATGTTGACTGTGTGCTGGACCTGTCTGTCAAGTCCAGCCT
TTCAGGAGTTGAAAATCTGAACAGCTCTTATTTCTCTTCACAGGACGTGCTGAGAAGCAACCTGGTGCAG
GTGAAGGTGGAGAAAGAGGCTTCCTGTGATGAGAGTGATGTTGGCACTAATGACTATGACATGGAACATA
GCACTGTGAAAGAAAGTGTGAGCACTAATAACAGGGTACAGTATGAGCCGGCCCATCTGGCTCCCCTGAG
GGAGGACTCGGTCTTGAGGGAGCTGGACCGGGAGGACAAAGCCAGTGATGATGAGATGATGACCCCAGAG
AGCGAGCGTGTCCAGGTGGAGGGAGGCATGGAGAGCAGTCTGCTCCCCTACGTCTCCAACATCCTGAGCC
CCGCGGGCCAGATCTTCATGTGCCCCCTGTGCAACAAGGTCTTCCCCAGCCCCCACATCCTGCAGATCCA
CCTGAGCACGCACTTCCGCGAGCAGGACGGCATCCGCAGCAAGCCCGCCGCCGATGTCAACGTGCCCACG
TGCTCGCTGTGTGGGAAGACTTTCTCTTGCATGTACACCCTCAAGCGCCACGAGAGGACTCACTCGGGGG
AGAAGCCCTACACATGCACCCAGTGCGGCAAGAGCTTCCAGTACTCGCACAACCTGAGCCGCCATGCCGT
GGTGCACACCCGCGAGAAGCCGCACGCCTGCAAGTGGTGCGAGCGCAGGTTCACGCAGTCCGGGGACCTG
TACAGACACATTCGCAAGTTCCACTGTGAGTTGGTGAACTCCTTGTCGGTCAAAAGCGAAGCACTGAGCT
TGCCTACTGTCAGAGACTGGACCTTAGAAGATAGCTCTCAAGAACTTTGGAAATAA

Translation (531 aa):
MCPKGYEDSMEFPDHSRHLLQCLSEQRHQGFLCDCTVLVGDAQFRAHRAVLASCSMYFHLFYKDQLDKRD
IVHLNSDIVTAPAFALLLEFMYEGKLQFKDLPIEDVLAAASYLHMYDIVKVCKKKLKEKATTEADSTKKE
EDASSCSDKVESLSDGSSHIAGDLPSDEDEGEDEKLNILPSKRDLAAEPGNMWMRLPSDSAGIPQAGGEA
EPHATAAGKTVASPCSSTESLSQRSVTSVRDSADVDCVLDLSVKSSLSGVENLNSSYFSSQDVLRSNLVQ
VKVEKEASCDESDVGTNDYDMEHSTVKESVSTNNRVQYEPAHLAPLREDSVLRELDREDKASDDEMMTPE
SERVQVEGGMESSLLPYVSNILSPAGQIFMCPLCNKVFPSPHILQIHLSTHFREQDGIRSKPAADVNVPT
CSLCGKTFSCMYTLKRHERTHSGEKPYTCTQCGKSFQYSHNLSRHAVVHTREKPHACKWCERRFTQSGDL
YRHIRKFHCELVNSLSVKSEALSLPTVRDWTLEDSSQELWK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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