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Genome Displays Related Resources Gene HomoloGene MANE RefSeq
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Report for CCDS1621.2 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
1621.2 |
Public |
Homo sapiens |
1 |
PLD5 |
24 |
110 |
108 |
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Public Note for CCDS 1621.1 |
The coding region has been updated to represent an alternate splice pattern that is more supported by the available transcript and protein data. |
Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23
Review status: Reviewed (by RefSeq, Havana and CCDS collaboration) Sequence IDs included in CCDS 1621.2
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
MANE |
Status in CCDS |
Seq. Status |
Links |
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EBI |
ENST00000442594.6 |
ENSP00000414188.3 |
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Accepted |
alive |
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EBI |
ENST00000536534.7 |
ENSP00000440896.1 |
MANE Select |
Accepted |
alive |
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NCBI |
NM_001372062.1 |
NP_001358991.1 |
MANE Select |
Accepted |
alive |
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RefSeq |
Length |
Related UniProtKB/SwissProt |
Length |
Identity |
Gaps |
Mismatches |
NP_001358991.1 |
536 |
Q8N7P1-1 |
536 |
100% |
0 |
0 |
Chromosomal Locations for CCDS 1621.2
Assembly GRCh38.p14 (GCF_000001405.40)
CCDS Sequence Data |
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Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (1611 nt): ATGGAGATCCGGCAGCACGAGTGGCTCTCGGCCTCCCCCCATGAGGGCTTCGAGCAGATGAGGCTCAAAA GCCGCCCCAAGGAGCCCTCCCCAAGCCTGACCCGAGTGGGCGCGAACTTCTACAGCAGCGTCAAGCAGCA GGACTACAGCGCCAGCGTCTGGCTTCGGAGGAAAGACAAGCTGGAGCACTCCCAGCAGAAGTGCATCGTG ATCTTTGCCCTGGTGTGCTGCTTTGCCATTCTGGTTGCACTGATCTTTTCAGCCGTGGACATCATGGGAG AGGATGAGGATGGACTCTCAGAAAAAAATTGCCAAAATAAATGTCGAATTGCCCTGGTGGAAAATATTCC TGAAGGCCTTAACTATTCAGAAAATGCACCATTTCACTTATCACTTTTCCAAGGCTGGATGAATTTACTC AACATGGCCAAAAAGTCTGTTGACATAGTGTCTTCCCATTGGGATCTCAACCACACTCATCCATCAGCAT GTCAGGGTCAACGTCTTTTTGAAAAGTTGCTCCAGCTGACTTCGCAAAATATTGAAATCAAGCTAGTGAG TGATGTAACAGCTGATTCAAAGGTATTAGAAGCCTTGAAATTAAAGGGAGCCGAGGTGACGTACATGAAC ATGACCGCTTACAACAAGGGCCGGCTGCAGTCCTCCTTCTGGATCGTGGACAAACAGCACGTGTATATCG GCAGTGCCGGTTTGGACTGGCAATCCCTGGGACAGATGAAAGAACTCGGTGTCATCTTCTACAACTGCAG CTGCCTGGTCCTAGATTTACAAAGGATATTTGCTCTATATAGTTCATTAAAATTCAAAAGCAGAGTGCCT CAAACCTGGTCCAAAAGACTCTATGGAGTCTATGACAATGAAAAGAAATTGCAACTTCAGTTGAATGAAA CCAAATCTCAAGCATTTGTATCGAATTCTCCAAAACTCTTTTGCCCTAAAAACAGAAGTTTTGACATAGA TGCCATCTACAGTGTGATAGATGATGCCAAGCAGTATGTGTACATCGCTGTCATGGACTACCTGCCTATC TCCAGCACAAGCACCAAAAGGACTTACTGGCCAGACTTGGATGCAAAAATAAGAGAAGCATTAGTTTTAC GAAGCGTTAGAGTTCGACTCCTTTTAAGCTTCTGGAAGGAAACTGATCCCCTTACGTTTAACTTTATTTC ATCTCTTAAAGCGATTTGCACTGAAATAGCCAACTGCAGTTTGAAAGTTAAATTTTTTGATCTGGAAAGA GAGAATGCTTGTGCTACAAAAGAACAAAAGAATCACACCTTTCCTAGGTTAAATCGCAACAAGTACATGG TGACAGATGGAGCAGCTTATATTGGAAATTTTGATTGGGTAGGGAATGATTTCACTCAGAATGCTGGCAC GGGCCTTGTTATCAACCAGGCAGATGTGAGGAACAACAGAAGCATCATTAAGCAACTTAAAGATGTGTTT GAAAGGGACTGGTATTCACCGTATGCCAAAACCTTACAGCCAACCAAACAGCCGAACTGCTCAAGCCTGT TCAAACTCAAACCCCTCTCCAACAAAACTGCCACAGACGACACAGGCGGAAAGGATCCCCGGAACGTATA A
Translation (536 aa): MEIRQHEWLSASPHEGFEQMRLKSRPKEPSPSLTRVGANFYSSVKQQDYSASVWLRRKDKLEHSQQKCIV IFALVCCFAILVALIFSAVDIMGEDEDGLSEKNCQNKCRIALVENIPEGLNYSENAPFHLSLFQGWMNLL NMAKKSVDIVSSHWDLNHTHPSACQGQRLFEKLLQLTSQNIEIKLVSDVTADSKVLEALKLKGAEVTYMN MTAYNKGRLQSSFWIVDKQHVYIGSAGLDWQSLGQMKELGVIFYNCSCLVLDLQRIFALYSSLKFKSRVP QTWSKRLYGVYDNEKKLQLQLNETKSQAFVSNSPKLFCPKNRSFDIDAIYSVIDDAKQYVYIAVMDYLPI SSTSTKRTYWPDLDAKIREALVLRSVRVRLLLSFWKETDPLTFNFISSLKAICTEIANCSLKVKFFDLER ENACATKEQKNHTFPRLNRNKYMVTDGAAYIGNFDWVGNDFTQNAGTGLVINQADVRNNRSIIKQLKDVF ERDWYSPYAKTLQPTKQPNCSSLFKLKPLSNKTATDDTGGKDPRNV
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