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Report for CCDS15808.3 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
15808.3 |
Public |
Mus musculus |
2 |
Egfl7 |
23 |
108 |
98 |
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Public Note for CCDS 15808.1 |
The coding region has been updated to extend the N-terminus. The use of an alternative upstream start codon, which appears to be rodent-specific, would result in a protein that is 3 aa longer. |
Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39
Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)
Attributes |
CDS uses downstream AUG |
Sequence IDs included in CCDS 15808.3
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
Status in CCDS |
Seq. Status |
Links |
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EBI |
ENSMUST00000100290.12 |
ENSMUSP00000097863.6 |
Accepted |
alive |
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NCBI |
NM_198725.3 |
NP_942018.3 |
Accepted |
alive |
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RefSeq |
Length |
Related UniProtKB/SwissProt |
Length |
Identity |
Gaps |
Mismatches |
NP_942018.3 |
262 |
Q9QXT5-2 |
262 |
100% |
0 |
0 |
Chromosomal Locations for CCDS 15808.3
Assembly GRCm38.p6 (GCF_000001635.26)
CCDS Sequence Data |
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Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (789 nt): ATGTGGGGCTCCGGAGAACTGCTTGTAGCATGGTTTCTAGTGTTGGCAGCAGATGGTACTACTGAGCATG TCTACAGACCCAGCCGTAGAGTGTGTACTGTGGGGATTTCCGGAGGTTCCATCTCGGAGACCTTTGTGCA GCGTGTATACCAGCCTTACCTCACCACTTGCGACGGACACAGAGCCTGCAGCACCTACCGAACCATCTAC CGGACTGCCTATCGCCGTAGCCCTGGGGTGACTCCCGCAAGGCCTCGCTATGCTTGCTGCCCTGGTTGGA AGAGGACCAGTGGGCTCCCTGGGGCTTGTGGAGCAGCAATATGCCAGCCTCCATGTGGGAATGGAGGGAG TTGCATCCGCCCAGGACACTGCCGCTGCCCTGTGGGATGGCAGGGAGATACTTGCCAGACAGATGTTGAT GAATGCAGTACAGGAGAGGCCAGTTGTCCCCAGCGCTGTGTCAATACTGTGGGAAGTTACTGGTGCCAGG GATGGGAGGGACAAAGCCCATCTGCAGATGGGACGCGCTGCCTGTCTAAGGAGGGGCCCTCCCCGGTGGC CCCAAACCCCACAGCAGGAGTGGACAGCATGGCGAGAGAGGAGGTGTACAGGCTGCAGGCTCGGGTTGAT GTGCTAGAACAGAAACTGCAGTTGGTGCTGGCCCCACTGCACAGCCTGGCCTCTCGGTCCACAGAGCATG GGCTACAAGATCCTGGCAGCCTGCTGGCCCATTCCTTCCAGCAGCTGGACCGAATTGATTCACTGAGCTC CTGCAAAAAAGATCTGTGA
Translation (262 aa): MWGSGELLVAWFLVLAADGTTEHVYRPSRRVCTVGISGGSISETFVQRVYQPYLTTCDGHRACSTYRTIY RTAYRRSPGVTPARPRYACCPGWKRTSGLPGACGAAICQPPCGNGGSCIRPGHCRCPVGWQGDTCQTDVD ECSTGEASCPQRCVNTVGSYWCQGWEGQSPSADGTRCLSKEGPSPVAPNPTAGVDSMAREEVYRLQARVD VLEQKLQLVLAPLHSLASRSTEHGLQDPGSLLAHSFQQLDRIDSLSSCKKDL
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