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Report for CCDS15609.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
15609.1 Public Mus musculus 1 Ptpn14 23 108 98 CCDS HistoryNCBI Gene:19250Re-query CCDS DB by CCDS ID:15609.1Re-query CCDS DB by GeneID:19250See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 15609.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000097442.8 ENSMUSP00000095051.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000097442.8Link to Ensembl Protein Viewer:ENSMUSP00000095051.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000097442Re-query CCDS DB by Protein ID:ENSMUSP00000095051
Original member Current member NCBI NM_008976.2 NP_033002.2 Accepted alive Link to Nucleotide Sequence:NM_008976.2Link to Protein Sequence:NP_033002.2Re-query CCDS DB by Nucleotide ID:NM_008976Re-query CCDS DB by Protein ID:NP_033002Link to BLAST:NP_033002.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_033002.2 1189 Q62130 1189 100% 0 0

Chromosomal Locations for CCDS 15609.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 1 (NC_000067.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 189786775 189786948 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 189798512 189798681 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 189822589 189822686 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 189825030 189825097 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 189832728 189832798 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 189833318 189833405 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 189836341 189836429 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 189839472 189839559 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 189840462 189840544 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 189843162 189843219 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 189846334 189846412 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 189850024 189851507 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 189854925 189855068 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 189856634 189856852 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 189860458 189860586 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 189863204 189863438 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 189865372 189865535 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 189869927 189870055 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3570 nt):
ATGCCTTTCGGCCTGAAGCTCCGCAGGACTCGGCGCTACAACGTCCTGAGCAAGAACTGCTTTGTTACCC
GGATCCGCCTGCTGGACAGCAATGTCATCGAGTGCACGCTGTCGGTGGAAAGCACGGGGCAAGAGTGCCT
GGAGGCCGTGGCCCAGAGGCTGGAGCTGAGGGAGACGCACTACTTCGGCCTTTGGTTTCTCAGCAAGAGC
CAGCAGGCGAGATGGGTAGAGCTGGAGAAGCCACTGAAGAAACATCTGGACAAGTTTGCTAACGAGCCTC
TGCTTTTCTTCGGAGTCATGTTCTATGTGCCAAATGTGTCACGGCTTCAGCAGGAGGCCACAAGATATCA
GTATTACCTGCAAGTCAAAAAAGACGTGCTTGAAGGACGGTTGCGGTGCTCCCTGGAACAAGTGATCCGG
CTGGCTGGCTTAGCTGTGCAAGCTGACTTCGGAGATTATAACCAGTTTGATTCCCAAGAGTTCCTCCGAG
AGTATGTGCTCTTTCCTATGGATTTGGCCATGGAGGAGGCGGCTCTGGAGGAGCTAACCCAGAAGGTGGC
CCAGGAACACAAAGCTCATAGCGGGATCCTGCCGGCTGAAGCTGAACTGATGTACATCAACGAGGTAGAG
CGTTTGGATGGATTTGGACAGGAGATCTTCCCCGTGAAGGACAGTCATGGCAACAGCGTGCACCTCGGCA
TCTTCTTCATGGGGATTTTTGTGAGGAACAGGGTCGGGAGACAGGCAGTGATATACAGGTGGAATGACAT
TGGGAGTGTTACTCACAGCAAAGCAGCCATCCTGTTGGAGCTGATTGACAAGGAGGAGACCGCGCTCTTC
CATACAGATGATATTGAAAATGCCAAGTACATTTCTCGGTTGTTTACCACTCGGCACAAATTTTACAAAC
AGAACAAGATCTGCACTGAACAGTCAAATTCTCCACCCCCAATTAGACGCCAGCCCACCTGGAGCCGGTC
CTCACTGCCAAGGCAGCAGCCGTATATCTTGCCTCCCATGCATGTCCAGTGCAGTGAGCACTACTCGGAG
ACCCATACTTCCCAAGACAGCATTTTCCCCGGGAACGAAGAAGCCTTGTACTGCCGTTCTCACAACAGCC
TGGACCTTAATTACTTGAACGGCACCGTCACCAATGGCAGCGTGTGCAGCGTTCACAGCGTCAACTCCCT
CAGCTGCTCTCAGAGCTTCATCCAGGCGTCTCCAGTGTCCTCCAACCTTAGCATCCCTGGGAGTGACATC
ATGAGGGCCGATTACATCCCCAGCCACCGCCACAGCACCATCATCGTGCCGTCTTACAGGCCGACCCCAG
ATTACGAGACGGTCATGAGGCAGATGAAGAGGGGTCTGATGCACGCAGACAGCCAGAGCCGGTCTCTGCG
TAACCTCAATATCATCAACACCCATGCCTATAACCAGCCCGAGGAACTGGTGTACAGCCAGCCGGAGATG
CGGGAGAGGCATCCCTACACGGTCCCCTATGCACACCAGGGGTGCTACGGTCACAAACTTGTAAGTCCGT
CTGACCAGATGAACCCCCAAAATTGTGCGATGCCTATCAAGCCAGGGGCCAGTTCCATCTCACACACAGT
GAGCACTCCAGAACTAGCCAACATGCAGCTCCAAGGAGCACAACACTATAGCACAGCCCACATGCTCAAG
AACTATCTATTCAGGCCGCCACCCCCTTACCCTCGGCCCCGTCCTGCCACCAGCACCCCAGACCTCGCCA
GCCACCGCCACAAGTACGTCAGCGGCAGCAGCCCTGATCTGGTAACTCGGAAGGTGCAGCTCTCCGTAAA
GACCTTCCAGGAGGACAGCTCACCTGTGGTCCATCAGTCTCTGCAGGAGGTGAGCGAACCCCTTACAGCC
ACCAAGCACCATGGCGGCGGCGGTGGCACGGTGAATAAACGCCACAGCCTGGAGGTGATGAACAGCATGG
TGAGAGGCATGGAGGCCATGACACTGAAGTCACTCAATATCCCCATGGCTCGCCGCAACACCCTTCGGGA
GCAGGGCCCTTCCGAGGAGACGGGCGGCCACGAAGTGCACGGTCTCCCCCAGTATCACCACAAGAAGACA
TTCTCGGATGCCACCATGCTGATCCACAGCAGTGAGAGCGAGGAAGAGGAGGAGACCCTGGAGGCTGCAC
CTCAGGTTCCTGTGCTTCGAGAGAAAGTAGAATACAGTGCCCAGCTGCAGGCTGCCCTGGCCCGCATCCC
CAACAGGCCCCCACCTGAGTACCCAGGGCCAAGAAAAAGTGTCAGTAATGGGGCACTGAGACAGGACCAG
GGAACCCCTCTTCCTGCCATGGCCAGGTGCAGGGTGCTGAGACACGGACCATCCAAGGCCCTCAGTGTCT
CCCGGGCAGAGCAGCTGGCTGTCAACGGTGCCTCTCTGGGTCCCTCCATCTCTGAGCCTGACCTAACCAG
CGTGAAGGAGCGGGTCAAGAAAGAGCCTGTGAAGGAAAGGCCGGTGTCAGAGATGTTCTCCCTGGAGGAC
AGCATTATAGAGAGAGAGATGATGATCAGGAATCTAGAGAAGCAGAAGATGACGGGCCCGCAGGCACAGA
AGAGACCGCTGATGTTGGCAGCGCTGAATGGGCTCTCGGTGGCCCGAGTGTCGGGGCGGGAAGACGGTCA
CCATGATGCCACCCGAGTCCCCATAGACGAGAGGCTCAGAGCCCTGAAGAAGAAGCTGGAAGATGGAATG
GTGTTCACAGAATATGAGCAGATTCCAAACAAAAAGGCCAACGGCGTCTTCAGCACCGCCACTCTGCCTG
AGAATGCCGAGCGCAGCCGGATCCGAGAAGTTGTCCCATACGAGGAGAATCGAGTGGAGCTCATCCCGAC
CAAAGAAAACAACACAGGCTATATCAACGCCTCCCACATCAAGGTGGTGGTCGGCGGATCAGAATGGCAC
TACATCGCCACCCAGGGGCCCTTGCCACATACGTGCCATGACTTCTGGCAGATGGTGTGGGAGCAGGGGG
TGAATGTGATCGCCATGGTCACTGCAGAGGAGGAGGGTGGACGGACCAAAAGCCATCGATACTGGCCCAA
ACTGGGGTCCAAGCATAGTTCTGCCACCTACGGCAAGTTCAAGGTCACCACAAAGTTCCGGACAGATTCT
GGTTGCTATGCAACGACGGGCCTAAAGGTGAAGCACCTGCTGTCCGGGCAGGAGAGGACCGTGTGGCACT
TGCAGTACACGGACTGGCCCCACCACGGCTGTCCAGAAGACGTCCAAGGATTTTTGTCCTACTTGGAGGA
AATCCAGTCAGTCCGACGCCACACCAACAGCGTGCTGGAAGGCATCAGGACCAGGCACCCCCCCATCGTG
GTTCACTGCAGCGCGGGTGTGGGAAGGACTGGTGTGGTTATCCTCTCTGAGCTCATGATCTACTGCCTGG
AACACAACGAAAAGGTGGAGGTGCCCACGATGCTGCGATTCCTCAGGGAGCAGAGGATGTTCATGATCCA
GACCATTGCGCAGTACAAGTTCGTCTACCAAGTCCTCGTCCAGTTCCTGCAGAATTCCAGGCTCATTTGA

Translation (1189 aa):
MPFGLKLRRTRRYNVLSKNCFVTRIRLLDSNVIECTLSVESTGQECLEAVAQRLELRETHYFGLWFLSKS
QQARWVELEKPLKKHLDKFANEPLLFFGVMFYVPNVSRLQQEATRYQYYLQVKKDVLEGRLRCSLEQVIR
LAGLAVQADFGDYNQFDSQEFLREYVLFPMDLAMEEAALEELTQKVAQEHKAHSGILPAEAELMYINEVE
RLDGFGQEIFPVKDSHGNSVHLGIFFMGIFVRNRVGRQAVIYRWNDIGSVTHSKAAILLELIDKEETALF
HTDDIENAKYISRLFTTRHKFYKQNKICTEQSNSPPPIRRQPTWSRSSLPRQQPYILPPMHVQCSEHYSE
THTSQDSIFPGNEEALYCRSHNSLDLNYLNGTVTNGSVCSVHSVNSLSCSQSFIQASPVSSNLSIPGSDI
MRADYIPSHRHSTIIVPSYRPTPDYETVMRQMKRGLMHADSQSRSLRNLNIINTHAYNQPEELVYSQPEM
RERHPYTVPYAHQGCYGHKLVSPSDQMNPQNCAMPIKPGASSISHTVSTPELANMQLQGAQHYSTAHMLK
NYLFRPPPPYPRPRPATSTPDLASHRHKYVSGSSPDLVTRKVQLSVKTFQEDSSPVVHQSLQEVSEPLTA
TKHHGGGGGTVNKRHSLEVMNSMVRGMEAMTLKSLNIPMARRNTLREQGPSEETGGHEVHGLPQYHHKKT
FSDATMLIHSSESEEEEETLEAAPQVPVLREKVEYSAQLQAALARIPNRPPPEYPGPRKSVSNGALRQDQ
GTPLPAMARCRVLRHGPSKALSVSRAEQLAVNGASLGPSISEPDLTSVKERVKKEPVKERPVSEMFSLED
SIIEREMMIRNLEKQKMTGPQAQKRPLMLAALNGLSVARVSGREDGHHDATRVPIDERLRALKKKLEDGM
VFTEYEQIPNKKANGVFSTATLPENAERSRIREVVPYEENRVELIPTKENNTGYINASHIKVVVGGSEWH
YIATQGPLPHTCHDFWQMVWEQGVNVIAMVTAEEEGGRTKSHRYWPKLGSKHSSATYGKFKVTTKFRTDS
GCYATTGLKVKHLLSGQERTVWHLQYTDWPHHGCPEDVQGFLSYLEEIQSVRRHTNSVLEGIRTRHPPIV
VHCSAGVGRTGVVILSELMIYCLEHNEKVEVPTMLRFLREQRMFMIQTIAQYKFVYQVLVQFLQNSRLI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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