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Report for CCDS15261.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
15261.1 Public Mus musculus 1 Fcmr 23 108 98 CCDS HistoryNCBI Gene:69169Re-query CCDS DB by CCDS ID:15261.1Re-query CCDS DB by GeneID:69169See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 15261.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000038829.6 ENSMUSP00000048303.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000038829.6Link to Ensembl Protein Viewer:ENSMUSP00000048303.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000038829Re-query CCDS DB by Protein ID:ENSMUSP00000048303
Original member NCBI NM_026976.3 NP_081252.1 Updated not alive Link to Nucleotide Sequence:NM_026976.3Link to Protein Sequence:NP_081252.1Re-query CCDS DB by Nucleotide ID:NM_026976Re-query CCDS DB by Protein ID:NP_081252
Current member NCBI NM_026976.4 NP_081252.1 Accepted alive Link to Nucleotide Sequence:NM_026976.4Link to Protein Sequence:NP_081252.1Re-query CCDS DB by Nucleotide ID:NM_026976Re-query CCDS DB by Protein ID:NP_081252Link to BLAST:NP_081252.1

Chromosomal Locations for CCDS 15261.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 1 (NC_000067.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 130865860 130865896 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 130874048 130874380 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 130875022 130875153 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 130875963 130876182 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 130877753 130877904 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 130878183 130878341 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 130878453 130878511 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 130880475 130880651 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1269 nt):
ATGGACTTTTGGCTTTGGTTACTTTACTTCCTGCCAGTGTCTGGGGCCCTGAGAGTCCTCCCAGAAGTAC
AGCTGAATGTAGAGTGGGGTGGATCCATTATCATCGAATGCCCACTCCCTCAACTACACGTAAGGATGTA
TCTGTGTCGGCAGATGGCCAAACCTGGGATATGCTCCACTGTGGTGTCCAACACCTTTGTCAAGAAGGAA
TATGAAAGGCGAGTCACCCTGACGCCATGCTTGGATAAGAAGCTATTCCTAGTGGAGATGACACAGCTGA
CGGAAAATGACGATGGAATCTATGCCTGTGGTGTGGGCATGAAGACAGACAAAGGCAAGACCCAGAAAAT
CACCCTGAATGTCCATAATGAATACCCAGAACCATTCTGGGAAGATGAATGGACCTCTGAGCGGCCAAGA
TGGTTGCACAGATTTCTGCAGCACCAGATGCCCTGGCTCCACGGGAGTGAACATCCCAGCTCTTCTGGAG
TCATAGCCAAAGTTACCACGCCAACTCCAAAGACTGAGGCCCCTCCGGTTCACCAGCCCTCCAGCATCAC
TTCAGTAACCCAACATCCCAGAGTTTACAGAGCATTTTCTGTGTCAGCTACCAAGTCCCCAGCGCTCCTG
CCAGCAACCACAGCCTCAAAGACTTCCACTCAGCAAGCAATCAGGCCCCTAGAGGCCAGCTACAGCCACC
ACACCAGACTTCATGAGCAAAGGACACGCCACCATGGCCCACACTATGGGAGAGAAGACCGAGGGCTTCA
CATCCCCATCCCAGAATTTCACATCCTGATTCCGACCTTCCTGGGCTTTCTCTTGCTGGTTCTTTTGGGA
CTGGTGGTAAAAAGAGCCATTCAAAGGAGGAGAGCCTCCTCCAGACGTGCGGGCCGACTAGCGATGAGGA
GGCGAGGCCGGGGGGCTTCCCGCCCGTTCCCCACACAGCGCCGGGATGCCTCGCAGAGGCCGCGCTCGCA
GAACAACGTCTACAGCGCCTGCCCCCGGCGCGCACGGGGACCAGACAGCTTGGGTCCAGCGGAGGCTCCG
CTCCTCAACGCCCCAGCCTCAGCGTCCCCCGCTTCTCCGCAGGTACTTGAAGCTCCTTGGCCCCACACCC
CATCTCTGAAGATGAGCTGTGAATACGTGAGCTTGGGCTACCAGCCTGCTGTCAACCTGGAAGACCCTGA
TTCAGATGATTACATCAATATTCCTGACCCATCTCATCTCCCTAGCTATGCCCCAGGGCCCAGATCTTCA
TGCCAATGA

Translation (422 aa):
MDFWLWLLYFLPVSGALRVLPEVQLNVEWGGSIIIECPLPQLHVRMYLCRQMAKPGICSTVVSNTFVKKE
YERRVTLTPCLDKKLFLVEMTQLTENDDGIYACGVGMKTDKGKTQKITLNVHNEYPEPFWEDEWTSERPR
WLHRFLQHQMPWLHGSEHPSSSGVIAKVTTPTPKTEAPPVHQPSSITSVTQHPRVYRAFSVSATKSPALL
PATTASKTSTQQAIRPLEASYSHHTRLHEQRTRHHGPHYGREDRGLHIPIPEFHILIPTFLGFLLLVLLG
LVVKRAIQRRRASSRRAGRLAMRRRGRGASRPFPTQRRDASQRPRSQNNVYSACPRRARGPDSLGPAEAP
LLNAPASASPASPQVLEAPWPHTPSLKMSCEYVSLGYQPAVNLEDPDSDDYINIPDPSHLPSYAPGPRSS
CQ


Links Key
 Links to:   History report
  BLAST report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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