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Report for CCDS14807.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
14807.1 Public Mus musculus 1 Rgs20 23 108 98 CCDS HistoryNCBI Gene:58175Re-query CCDS DB by CCDS ID:14807.1Re-query CCDS DB by GeneID:58175See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 14807.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000002533.14 ENSMUSP00000002533.8 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000002533.14Link to Ensembl Protein Viewer:ENSMUSP00000002533.8Re-query CCDS DB by Nucleotide ID:ENSMUST00000002533Re-query CCDS DB by Protein ID:ENSMUSP00000002533
Original member Current member NCBI NM_021374.5 NP_067349.2 Accepted alive Link to Nucleotide Sequence:NM_021374.5Link to Protein Sequence:NP_067349.2Re-query CCDS DB by Nucleotide ID:NM_021374Re-query CCDS DB by Protein ID:NP_067349Link to BLAST:NP_067349.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_067349.2 239 Q9QZB1 239 100% 0 0

Chromosomal Locations for CCDS 14807.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 1 (NC_000067.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 4910474 4910662 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 4912314 4912548 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 4916897 4916980 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 4923847 4923989 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 5019311 5019379 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (720 nt):
ATGCGCACGGCCAACGGAGGCCCGAGGGCCAGAGCTTCCCCTTCGGCTAGCCCAGCGGACCCTGGCCTGC
CTGAGGGATCTGAGCGGACGGAAATGCGGATGCGGCAGATGTGCGGCGGAAGTGAGACCCAGGGCCCTGC
CCCAAGCCAGCAGGGTGGCCGGGGCTCCAACGCCTGCTGCTTCTGTTGGTGCTGCTGCTGCACCTGTTCT
TGCCTCACTGTCAGAAACCAAGAAGACCAGAGACCCCAAAGAGCCTCCCATGAAATCAGAACAGACATTC
CAGCATGTGAAGAAAGCCCCACGCCTACTCTGGAAGAAGTCTGTGCCTGGGCCCAGTCTTTTGATAACCT
GATGGTCACTCCAGCCGGAAGAAATGCATTCCGGGAATTTCTTCGAACAGAATTCAGTGAAGAAAACATG
CTCTTCTGGATGGCCTGTGAAGAACTGAAAAGGGAAGCTAATAAAAGCACTATTGAGGAGAAAGCAAGGA
TAATCTATGAGGACTATATTTCTATTCTCTCTCCTAAAGAGGTCAGCTTGGACTCCCGAGTACGAGAGGT
TATCAACAGAAACATGGTGGATCCATCCCAGCACATATTCGATGACGCTCAACTGCAGATCTACACTCTA
ATGCACAGAGACTCCTATCCCCGCTTCATGAACTCCACAGTCTATAAGGATTTGCTTACGTCCTTAGCTG
AGAAAACAGTTGAAGCATAG

Translation (239 aa):
MRTANGGPRARASPSASPADPGLPEGSERTEMRMRQMCGGSETQGPAPSQQGGRGSNACCFCWCCCCTCS
CLTVRNQEDQRPQRASHEIRTDIPACEESPTPTLEEVCAWAQSFDNLMVTPAGRNAFREFLRTEFSEENM
LFWMACEELKREANKSTIEEKARIIYEDYISILSPKEVSLDSRVREVINRNMVDPSQHIFDDAQLQIYTL
MHRDSYPRFMNSTVYKDLLTSLAEKTVEA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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