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Report for CCDS14791.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
14791.1 Public Homo sapiens Y HSFY2 24 110 108 CCDS HistoryNCBI Gene:159119Re-query CCDS DB by CCDS ID:14791.1Re-query CCDS DB by GeneID:159119See the combined annotation on chromosome Y in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 14791.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000304790.3 ENSP00000306549.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000304790.3Link to Ensembl Protein Viewer:ENSP00000306549.3Re-query CCDS DB by Nucleotide ID:ENST00000304790Re-query CCDS DB by Protein ID:ENSP00000306549
Original member Current member NCBI NM_153716.2 NP_714927.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_153716.2Link to Protein Sequence:NP_714927.1Re-query CCDS DB by Nucleotide ID:NM_153716Re-query CCDS DB by Protein ID:NP_714927Link to BLAST:NP_714927.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_714927.1 401 Q96LI6-1 401 100% 0 0

Chromosomal Locations for CCDS 14791.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome Y (NC_000024.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome YLink to Ensembl Genome Browser on chromosome YSee the combined annotation on chromosome Y in Sequence Viewer

Chromosome Start Stop Links
Y 18771935 18772627 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome YLink to Ensembl Genome Browser on chromosome Y
Y 18773106 18773618 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome YLink to Ensembl Genome Browser on chromosome Y

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1206 nt):
ATGGCACATGTTTCTTCAGAAACTCAAGATGTTTCCCCCAAAGATGAATTAACTGCTTCAGAAGCCTCCA
CTAGGTCTCCATTGTGTGAACACACCTTCCCTGGGGACTCAGACTTACGGTCAATGATTGAAGAACATGC
TTTTCAGGTTTTGTCACAAGGATCCTTGTTAGAAAGTCCAAGTTACACAGTTTGTGTCTCTGAGCCAGAT
AAAGATGATGATTTTCTTTCTCTGAACTTTCCCAGGAAACTTTGGAAAATAGTGGAAAGTGACCAATTCA
AGTCTATTTCATGGGATGAGAATGGAACTTGCATAGTGATTAATGAAGAACTCTTCAAGAAAGAAATTTT
GGAAACAAAGGCTCCTTACAGAATATTTCAAACTGATGCTATCAAAAGTTTTGTTCGACAGCTCAACCTT
TATGGATTTAGTAAAATTCAACAGAATTTTCAAAGATCTGCCTTTCTAGCCACCTTTCTGTCAGAAGAGA
AAGAATCGTCTGTCTTAAGCAAGTTAAAGTTCTATTATAATCCAAATTTCAAGCGTGGCTATCCCCAACT
TTTAGTAAGAGTGAAGAGAAGAATTGGTGTTAAAAATGCTTCACCTATATCTACTTTATTCAACGAAGAT
TTCAACAAGAAGCATTTTAGAGCAGGGGCTAACATGGAGAATCATAATTCTGCCTTAGCTGCTGAAGCTA
GTGAAGAAAGTTTATTTTCAGCCTCTAAAAATTTAAATATGCCTCTAACAAGGGAATCTTCTGTCAGACA
GATAATTGCAAATTCATCTGTCCCCATTAGAAGTGGTTTCCCTCCTCCTTCACCTTCAACCTCAGTTGGA
CCATCAGAACAAATTGCAACAGATCAACATGCTATTTTAAATCAGTTGACCACTATTCATATGCACTCTC
ATAGTACCTACATGCAAGCAAGGGGCCACATTGTGAATTTTATTACAACCACAACTTCTCAATACCACAT
CATATCTCCCTTACAAAATGGTTATTTTGGGCTGACAGTGGAACCATCTGCTGTTCCCACACGATATCCT
CTGGTATCAGTCAATGAGGCTCCATATCGTAACATGCTACCAGCAGGCAACCCGTGGTTGCAAATGCCTA
CGATCGCTGATAGATCAGCTGCCCCTCATTCCAGGCTAGCTCTTCAACCATCACCACTGGACAAATATCA
CCCTAATTACAACTGA

Translation (401 aa):
MAHVSSETQDVSPKDELTASEASTRSPLCEHTFPGDSDLRSMIEEHAFQVLSQGSLLESPSYTVCVSEPD
KDDDFLSLNFPRKLWKIVESDQFKSISWDENGTCIVINEELFKKEILETKAPYRIFQTDAIKSFVRQLNL
YGFSKIQQNFQRSAFLATFLSEEKESSVLSKLKFYYNPNFKRGYPQLLVRVKRRIGVKNASPISTLFNED
FNKKHFRAGANMENHNSALAAEASEESLFSASKNLNMPLTRESSVRQIIANSSVPIRSGFPPPSPSTSVG
PSEQIATDQHAILNQLTTIHMHSHSTYMQARGHIVNFITTTTSQYHIISPLQNGYFGLTVEPSAVPTRYP
LVSVNEAPYRNMLPAGNPWLQMPTIADRSAAPHSRLALQPSPLDKYHPNYN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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