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Report for CCDS14544.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
14544.1 Public Homo sapiens X IRS4 24 110 108 CCDS HistoryNCBI Gene:8471Re-query CCDS DB by CCDS ID:14544.1Re-query CCDS DB by GeneID:8471See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 14544.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000564206.2 ENSP00000505547.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000564206.2Link to Ensembl Protein Viewer:ENSP00000505547.1Re-query CCDS DB by Nucleotide ID:ENST00000564206Re-query CCDS DB by Protein ID:ENSP00000505547
Original member Current member NCBI NM_003604.2 NP_003595.1 Accepted alive Link to Nucleotide Sequence:NM_003604.2Link to Protein Sequence:NP_003595.1Re-query CCDS DB by Nucleotide ID:NM_003604Re-query CCDS DB by Protein ID:NP_003595Link to BLAST:NP_003595.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_003595.1 1257 O14654 1257 100% 0 0

Chromosomal Locations for CCDS 14544.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 108732571 108736344 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3774 nt):
ATGGCGAGTTGCTCCTTCACTCGCGACCAAGCGACAAGAAGACTAAGAGGTGCAGCAGCGGCGGCAGCGG
CAGCTCTAGCAGCAGTGGTGACCACCCCGCTTCTTTCCTCGGGAACCCCGACCGCACTCATTGGGACCGG
GTCGTCTTGTCCGGGAGCCATGTGGCTCTCCACGGCCACTGGCTCCCGGTCAGACTCCGAGTCCGAAGAG
GAGGACCTGCCCGTCGGGGAGGAAGTCTGCAAACGCGGCTACCTGCGGAAACAGAAGCATGGGCACAGGC
GCTACTTCGTGCTCAAACTCGAGACTGCTGACGCCCCAGCTCGGCTGGAATACTACGAAAATGCCAGGAA
GTTCCGGCACAGTGTCCGCGCCGCGGCGGCTGCAGCAGCGGCGGCCGCCTCTGGCGCCGCGATCCCCCCG
CTCATTCCACCGCGGCGCGTGATCACCCTATACCAGTGCTTTTCCGTGAGCCAGCGAGCAGATGCAAGGT
ACCGACACCTCATTGCTCTTTTCACCCAAGACGAATACTTCGCGATGGTGGCCGAGAACGAGTCGGAGCA
GGAAAGCTGGTACTTGCTGCTCAGCCGCCTCATCCTCGAGAGCAAGCGCCGCCGCTGCGGCACGCTCGGC
GCGCAGCCGGACGGAGAGCCGGCCGCGCTGGCGGCGGCAGCGGCGGCGGAGCCACCCTTCTATAAAGATG
TGTGGCAGGTAATAGTCAAACCCAGGGGGCTGGGGCACAGAAAAGAGCTGAGCGGCGTGTTCCGGCTGTG
TCTAACCGACGAGGAGGTCGTGTTTGTGAGGCTGAACACCGAAGTGGCCAGCGTGGTCGTCCAGCTCCTG
AGCATCCGTCGCTGTGGACACTCGGAGCAGTATTTCTTCTTGGAAGTAGGCAGGTCCACTGTCATCGGTC
CGGGAGAGCTCTGGATGCAGGTCGATGACTGTGTGGTTGCCCAAAACATGCATGAGCTGTTTTTGGAGAA
GATGAGAGCCTTGTGTGCAGACGAATACAGAGCCCGCTGCCGCAGCTACAGCATCAGCATCGGCGCCCAC
CTGTTAACCCTGCTGTCCGCTAGGAGGCACCTGGGCTTGGTGCCGCTCGAGCCGGGAGGCTGGCTCAGAA
GGTCCCGCTTTGAGCAGTTTTGCCACCTCAGGGCCATCGGCGACGGGGAAGACGAGATGCTTTTCACCAG
GCGCTTCGTAACACCCAGCGAGCCTGTGGCCCACTCCAGGCGAGGAAGACTGCACCTGCCCAGAGGGCGC
AGGTCAAGGAGAGCGGTTTCAGTGCCGGCCAGCTTTTTTCGCCGCTTAGCACCCAGCCCAGCACGTCCCC
GGCACCCTGCAGAAGCCCCGAACAATGGAGCTCGCCTGTCTTCTGAAGTGTCTGGTTCTGGCTCTGGCAA
CTTTGGGGAGGAAGGCAATCCCCAGGGCAAAGAAGATCAGGAAGGAAGCGGAGGTGACTACATGCCTATG
AACAATTGGGGCTCAGGAAATGGCCGGGGCTCAGGAGGTGGCCAGGGCTCAAATGGCCAAGGCTCCAGTA
GCCATAGCTCGGGAGGAAACCAGTGTTCAGGCGAGGGACAGGGATCCCGAGGTGGTCAGGGCTCAAATGG
CCAGGGCTCAGGAGGAAACCAGTGCTCTAGAGATGGCCAGGGCACCGCAGGTGGGCACGGTTCAGGTGGT
GGCCAGAGACCTGGAGGTGGGCATGGCTCAGGTGGTGGCCAGGGACCTGGAGATGGCCATGGCTCAGGTG
GTGGCAAGAACTCTGGGGGGGGCAAAGGCTCAGGAAGTGGGAAAGGATCCGATGGTGATGGTGAACGTGG
AAAATCTCTGAAGAAAAGATCCTATTTTGGCAAATTAACTCAAAGCAAGCAACAGCAAATGCCACCACCT
CCACCACCTCCTCCTCCACCCCCACCAGCTGGAGGAACTGGTGGAAAAGGGAAGTCTGGGGGAAGATTCA
GACTTTATTTTTGTGTTGACAGAGGAGCCACGAAAGAATGCAAAGAAGCCAAAGAAGTGAAAGATGCAGA
GATCCCAGAAGGTGCAGCTCGAGGTCCCCACAGAGCCAGAGCTTTTGATGAAGATGAGGATGACCCATAC
GTGCCAATGAGGCCAGGGGTGGCCACCCCTCTTGTAAGCTCCAGTGATTATATGCCAATGGCTCCTCAAA
ATGTCTCTGCTTCAAAAAAGCGCCACTCTCGATCCCCTTTTGAAGATTCAAGAGGGTACATGATGATGTT
TCCCAGAGTGAGCCCACCACCTGCTCCGAGTCCTCCAAAAGCACCTGATACTAATAAAGAGGATGACTCA
AAGGACAATGACAGTGAGAGTGACTACATGTTTATGGCTCCTGGAGCCGGTGCAATTCCAAAAAACCCCA
GAAATCCTCAGGGTGGCTCTTCCTCCAAAAGTTGGAGCTCCTACTTCTCTCTACCAAACCCTTTTCGGAG
CTCACCTTTGGGACAGAATGACAACAGTGAGTATGTGCCAATGTTACCTGGAAAGTTCCTGGGGAGGGGC
CTAGACAAAGAAGTCTCCTATAACTGGGACCCCAAAGATGCAGCTTCAAAGCCTTCAGGTGAGGGATCAT
TCTCAAAGCCTGGAGATGGGGGATCACCTTCAAAGCCTTCAGATCATGAGCCCCCAAAGAATAAAGCTAA
GAGACCTAACCGACTTTCTTTTATTACAAAAGGATATAAAATCAAGCCAAAACCACAAAAGCCCACACAT
GAGCAGAGAGAAGCTGACAGCTCTAGTGACTACGTCAACATGGACTTCACTAAAAGAGAGAGCAATACAC
CAGCTCCCTCTACTCAAGGACTACCAGATTCGTGGGGCATAATTGCTGAACCCAGACAGTCAGCCTTTTC
TAATTATGTGAATGTTGAGTTTGGAGTGCCATTTCCAAATCCAGCAAACGACCTCTCAGATCTTTTAAGA
GCTATACCACGTGCCAACCCCTTATCTCTGGACAGTGCTAGGTGGCCACTTCCTCCCCTTCCCCTCAGTG
CTACAGGTAGCAATGCTATTGAGGAAGAGGGTGACTACATTGAAGTAATTTTCAACTCAGCAATGACACC
AGCCATGGCTCTTGCTGACAGTGCCATTCGCTATGATGCTGAAACAGGTCGAATCTATGTGGTCGACCCA
TTTTCTGAGTGCTGTATGGATATTTCTCTCTCCCCCAGCCGATGTTCTGAACCACCACCTGTAGCTAGGC
TGCTGCAGGAAGAAGAGCAGGAGAGAAGACGCCCACAAAGCCGTTCTCAAAGTTTCTTTGCAGCAGCCAG
AGCCGCTGTCTCTGCTTTTCCAACAGACAGCCTCGAGAGAGACCTTTCCCCATCCTCAGCCCCGGCTGTC
GCTTCGGCTGCAGAGCCGACTTTAGCCCTCAGCCAAGTTGTAGCTGCGGCCTCCGCGCTCGCCGCAGCCC
CGGGCATCGGCGCAGCAGCCGCAGCTGCTGGATTTGACTCCGCCTCTGCCCGCTGGTTTCAACCTGTTGC
TAATGCTGCTGATGCCGAAGCAGTAAGGGGAGCCCAAGACGTTGCCGGTGGCTCGAACCCTGGAGCCCAC
AACCCATCTGCAAACCTTGCCAGAGGTGATAACCAGGCTGGCGGGGCTGCCGCTGCAGCTGCCGCTCCGG
AACCACCACCTCGCAGTCGCCGGGTGCCAAGACCCCCGGAGAGAGAAGATTCTGACAACGACGACGACAC
TCACGTGAGAATGGATTTTGCCAGACGTGATAATCAGTTCGACTCTCCCAAAAGAGGTCGGTAA

Translation (1257 aa):
MASCSFTRDQATRRLRGAAAAAAAALAAVVTTPLLSSGTPTALIGTGSSCPGAMWLSTATGSRSDSESEE
EDLPVGEEVCKRGYLRKQKHGHRRYFVLKLETADAPARLEYYENARKFRHSVRAAAAAAAAAASGAAIPP
LIPPRRVITLYQCFSVSQRADARYRHLIALFTQDEYFAMVAENESEQESWYLLLSRLILESKRRRCGTLG
AQPDGEPAALAAAAAAEPPFYKDVWQVIVKPRGLGHRKELSGVFRLCLTDEEVVFVRLNTEVASVVVQLL
SIRRCGHSEQYFFLEVGRSTVIGPGELWMQVDDCVVAQNMHELFLEKMRALCADEYRARCRSYSISIGAH
LLTLLSARRHLGLVPLEPGGWLRRSRFEQFCHLRAIGDGEDEMLFTRRFVTPSEPVAHSRRGRLHLPRGR
RSRRAVSVPASFFRRLAPSPARPRHPAEAPNNGARLSSEVSGSGSGNFGEEGNPQGKEDQEGSGGDYMPM
NNWGSGNGRGSGGGQGSNGQGSSSHSSGGNQCSGEGQGSRGGQGSNGQGSGGNQCSRDGQGTAGGHGSGG
GQRPGGGHGSGGGQGPGDGHGSGGGKNSGGGKGSGSGKGSDGDGERGKSLKKRSYFGKLTQSKQQQMPPP
PPPPPPPPPAGGTGGKGKSGGRFRLYFCVDRGATKECKEAKEVKDAEIPEGAARGPHRARAFDEDEDDPY
VPMRPGVATPLVSSSDYMPMAPQNVSASKKRHSRSPFEDSRGYMMMFPRVSPPPAPSPPKAPDTNKEDDS
KDNDSESDYMFMAPGAGAIPKNPRNPQGGSSSKSWSSYFSLPNPFRSSPLGQNDNSEYVPMLPGKFLGRG
LDKEVSYNWDPKDAASKPSGEGSFSKPGDGGSPSKPSDHEPPKNKAKRPNRLSFITKGYKIKPKPQKPTH
EQREADSSSDYVNMDFTKRESNTPAPSTQGLPDSWGIIAEPRQSAFSNYVNVEFGVPFPNPANDLSDLLR
AIPRANPLSLDSARWPLPPLPLSATGSNAIEEEGDYIEVIFNSAMTPAMALADSAIRYDAETGRIYVVDP
FSECCMDISLSPSRCSEPPPVARLLQEEEQERRRPQSRSQSFFAAARAAVSAFPTDSLERDLSPSSAPAV
ASAAEPTLALSQVVAAASALAAAPGIGAAAAAAGFDSASARWFQPVANAADAEAVRGAQDVAGGSNPGAH
NPSANLARGDNQAGGAAAAAAAPEPPPRSRRVPRPPEREDSDNDDDTHVRMDFARRDNQFDSPKRGR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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