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Report for CCDS1452.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
1452.1 Public Homo sapiens 1 DSTYK 24 110 108 CCDS HistoryNCBI Gene:25778Re-query CCDS DB by CCDS ID:1452.1Re-query CCDS DB by GeneID:25778See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 1452.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000367161.7 ENSP00000356129.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000367161.7Link to Ensembl Protein Viewer:ENSP00000356129.3Re-query CCDS DB by Nucleotide ID:ENST00000367161Re-query CCDS DB by Protein ID:ENSP00000356129
Original member Current member NCBI NM_199462.3 NP_955749.1 Accepted alive Link to Nucleotide Sequence:NM_199462.3Link to Protein Sequence:NP_955749.1Re-query CCDS DB by Nucleotide ID:NM_199462Re-query CCDS DB by Protein ID:NP_955749Link to BLAST:NP_955749.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_955749.1 884 Q6XUX3-2 884 100% 0 0

Chromosomal Locations for CCDS 1452.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 205147558 205147745 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 205150680 205150794 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 205157273 205157386 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 205159547 205159679 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 205160114 205160270 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 205161258 205161387 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 205162036 205162212 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 205162923 205163006 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 205163723 205163955 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 205169163 205169832 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 205187418 205187806 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 205211271 205211535 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2655 nt):
ATGGAGGGCGACGGGGTGCCATGGGGCAGCGAGCCCGTCTCGGGTCCCGGCCCCGGCGGCGGCGGAATGA
TC
CGCGAGCTGTGCCGGGGCTTCGGCCGCTACCGCCGCTACCTGGGACGGCTGCGACAGAACCTGCGCGA
G
ACCCAGAAGTTCTTCCGCGACATCAAGTGCTCCCACAACCACACTTGTCTCTCCTCCCTCACGGGCGGC
GGC
GGGGCCGAGCGCGGCCCTGCAGGCGATGTCGCCGAAACCGGGCTGCAGGCGGGCCAACTGAGCTGCA
TT
TCCTTCCCACCTAAGGAAGAGAAGTACCTCCAGCAGATTGTGGACTGCCTCCCTTGCATACTGATCCT
C
GGCCAGGATTGTAACGTCAAGTGCCAGCTGTTGAATCTGCTGTTGGGGGTGCAGGTGCTTCCCACCACC
AAG
CTGGGCAGTGAGGAGAGCTGTAAGCTTCGGCGCCTCCGCTTCACCTATGGGACTCAGACTCGGGTCA
GC
CTGGCGCTCCCTGGACAGTATGAACTAGTGCACACGCTGGTTGCTCATCAGGGCAACTGGGAGACCAT
C
CCTGAGGAGGATCTGGAGGTCCAAGAGAACAATGAGGATGCTGCTCATGTTTTAGCGGAACTGGAGGTA
ACG
ATGCACCATGCTCTCTTACAGGAAGTGGACGTTGTGGTAGCACCATGCCAAGGCCTCCGGCCCACAG
TG
GATGTTCTGGGTGACTTGGTGAATGATTTCTTGCCTGTGATAACCTATGCACTCCACAAAGATGAACT
C
TCTGAGAGGGATGAGCAAGAGCTTCAGGAAATCCGAAAGTATTTCTCCTTTCCTGTATTCTTTTTCAAA
GTG
CCGAAACTGGGCTCGGAGATAATAGACTCCTCAACCAGGAGAATGGAGAGCGAAAGATCACCGCTTT
AT
CGCCAGCTAATTGACCTGGGCTATCTGAGCAGCAGTCACTGGAACTGTGGGGCTCCTGGCCAGGATAC
T
AAAGCTCAGAGCATGTTGGTGGAACAGAGTGAAAAGCTGAGACACTTGAGCACATTTTCTCACCAGGTG
TTA
CAGACTCGCCTGGTGGATGCAGCCAAGGCCCTGAACCTGGTGCACTGCCACTGCCTTGACATCTTTA
TT
AACCAGGCATTTGACATGCAGCGGGACCTGCAGATCACTCCCAAACGTCTGGAATATACTCGAAAAAA
G
GAGAATGAGTTGTATGAATCATTGATGAATATTGCCAACCGAAAGCAGGAGGAAATGAAGGATATGATT
GTT
GAGACACTTAATACCATGAAGGAGGAACTTCTGGATGATGCTACTAACATGGAGTTTAAAGACGTCA
TT
GTCCCTGAGAATGGAGAACCAGTAGGCACCAGAGAGATCAAATGCTGCATCCGACAGATCCAGGAACT
C
ATCATCTCCCGACTTAATCAGGCAGTGGCTAATAAGCTGATCAGCTCAGTGGATTACCTGAGGGAAAGC
TTC
GTCGGAACCCTGGAACGATGTCTGCAGAGCCTGGAGAAGTCTCAGGATGTCTCAGTTCACATCACCA
GT
AATTATCTCAAACAGATCTTAAATGCTGCCTATCATGTTGAAGTCACGTTTCACTCAGGGTCGTCAGT
T
ACAAGGATGCTATGGGAGCAAATCAAACAGATCATCCAGCGCATCACATGGGTGAGCCCACCTGCCATC
ACT
CTGGAATGGAAGAGGAAGGTGGCCCAGGAAGCCATTGAGAGCCTCAGCGCCTCCAAATTGGCTAAGA
GC
ATTTGCAGCCAATTCCGGACTCGGCTCAATAGTTCCCACGAGGCTTTTGCAGCCTCCTTGCGGCAGCT
G
GAAGCTGGCCACTCAGGCCGGTTAGAGAAAACGGAAGATCTATGGCTGAGGGTTCGGAAAGATCATGCT
CCC
CGCCTGGCCCGCCTTTCTCTGGAAAGCTGTTCTTTACAGGATGTCTTGCTTCATCGTAAACCTAAAC
TG
GGACAGGAACTGGGCCGGGGCCAGTATGGTGTGGTATACCTGTGTGACAACTGGGGAGGACACTTCCC
T
TGTGCCCTCAAATCAGTTGTCCCTCCAGATGAGAAGCACTGGAATGATCTGGCTTTGGAATTTCACTAT
ATG
AGGTCTCTGCCGAAGCATGAGCGATTGGTGGATCTCCATGGTTCAGTCATTGACTACAACTATGGTG
GT
GGCTCCAGCATTGCTGTGCTCCTCATTATGGAGCGGCTACACCGGGATCTCTACACAGGGCTGAAGGC
T
GGGCTGACCCTGGAGACACGTTTGCAGATAGCACTAGATGTGGTGGAGGGAATCCGCTTCCTGCACAGC
CAG
GGACTTGTCCATCGTGATATCAAACTGAAAAATGTGCTGCTGGATAAGCAGAACCGTGCCAAGATCA
CT
GACTTAGGATTCTGCAAGCCAGAGGCCATGATGTCAGGCAGCATTGTGGGGACACCAATCCATATGGC
C
CCTGAACTTTTCACAGGGGCTCGCCCAGAACGTCTTCCTGTGTTTGATGAGGAGTGCTGGCAGTTGATG
GAA
GCCTGTTGGGATGGCGACCCCTTGAAGAGGCCTCTCTTGGGCATTGTCCAGCCCATGCTCCAGGGCA
TC
ATGAATCGGCTCTGCAAGTCCAATTCTGAGCAGCCAAACAGAGGACTAGATGATTCTACTTGA


Translation (884 aa):
MEGDGVPWGSEPVSGPGPGGGGMIRELCRGFGRYRRYLGRLRQNLRETQKFFRDIKCSHNHTCLSSLTGG
G
GAERGPAGDVAETGLQA
GQLSCISFPPKEEKYLQQIVDCLPCILILGQDCNVKCQLLNLLLGVQVLPTT
K
LGSEESCKLRRLRFTYGTQTRVSLALPGQYELVHTLVAHQGNWETIPEEDLEVQENNEDAAHVLAELEV
T
MHHALLQ
EVDVVVAPCQGLRPTVDVLGDLVNDFLPVITYALHKDELSERDEQELQEIRKYFSFPVFFFK
V
PKLGSEIIDSSTRRMESERSPLYRQLIDLGYLSSSHWNCGAPGQDTKAQSMLVEQSEKLRHLSTFSHQV
L
QTRLVDAAKALNLVHCHCLDIFINQAFDMQRDLQITPKRLEYTRKKENELYESLMNIANRKQEEMKDMI
V
ETLNTMKEELLDDATNMEFK
DVIVPENGEPVGTREIKCCIRQIQELIISRLNQAVANKLISSVDYLRES
F
VGTLERCLQSLEKSQDVSVHITSNYLKQ
ILNAAYHVEVTFHSGSSVTRMLWEQIKQIIQRITWVSPPAI
T
LEWKRKVAQEAIESLSASKLAKSICSQFRTRLNSSHEAFAASLRQ
LEAGHSGRLEKTEDLWLRVRKDHA
P
RLARLSLESCSLQDVLLH
RKPKLGQELGRGQYGVVYLCDNWGGHFPCALKSVVPPDEKHWNDLALEFHY
M
RSLPKHERLVDLHGSVIDYNYGGGSSIAVLLIMERLHRDLYTGLKAGLTLETRLQIALDVVEGIRFLHS
Q
GLVHRDIKLKNVL
LDKQNRAKITDLGFCKPEAMMSGSIVGTPIHMAPELFTGARPERLPVFDEECWQLM
E
ACWDGDPLKRPLLGIVQPMLQGIMNRLCKSNSEQPNRGLDDST




Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser