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Report for CCDS14506.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
14506.1 Public Homo sapiens X TCEAL7 24 110 108 CCDS HistoryNCBI Gene:56849Re-query CCDS DB by CCDS ID:14506.1Re-query CCDS DB by GeneID:56849See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 14506.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000332431.5 ENSP00000329794.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000332431.5Link to Ensembl Protein Viewer:ENSP00000329794.4Re-query CCDS DB by Nucleotide ID:ENST00000332431Re-query CCDS DB by Protein ID:ENSP00000329794
Original member Current member EBI ENST00000372666.1 ENSP00000361751.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000372666.1Link to Ensembl Protein Viewer:ENSP00000361751.1Re-query CCDS DB by Nucleotide ID:ENST00000372666Re-query CCDS DB by Protein ID:ENSP00000361751
Original member Current member NCBI NM_001348258.2 NP_001335187.1 Accepted alive Link to Nucleotide Sequence:NM_001348258.2Link to Protein Sequence:NP_001335187.1Re-query CCDS DB by Nucleotide ID:NM_001348258Re-query CCDS DB by Protein ID:NP_001335187Link to BLAST:NP_001335187.1
Original member Current member NCBI NM_152278.5 NP_689491.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_152278.5Link to Protein Sequence:NP_689491.1Re-query CCDS DB by Nucleotide ID:NM_152278Re-query CCDS DB by Protein ID:NP_689491Link to BLAST:NP_689491.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001335187.1 100 Q9BRU2 100 100% 0 0
NP_689491.1 100 Q9BRU2 100 100% 0 0

Chromosomal Locations for CCDS 14506.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 103331404 103331706 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (303 nt):
ATGCAAAAACCCTGCAAAGAAAACGAAGGAAAGCCAAAGTGCAGCGTGCCAAAGAGGGAGGAAAAACGCC
CGTATGGAGAATTTGAACGCCAGCAAACAGAAGGGAATTTTAGACAGAGGCTGCTTCAGTCTCTCGAAGA
ATTTAAAGAGGACATAGACTATAGGCATTTTAAAGATGAAGAAATGACAAGGGAGGGAGATGAGATGGAA
AGGTGTTTGGAAGAGATAAGGGGTCTGAGAAAGAAATTTAGGGCTCTGCATTCTAACCATAGGCATTCTC
GGGACCGTCCTTATCCCATTTAA

Translation (100 aa):
MQKPCKENEGKPKCSVPKREEKRPYGEFERQQTEGNFRQRLLQSLEEFKEDIDYRHFKDEEMTREGDEME
RCLEEIRGLRKKFRALHSNHRHSRDRPYPI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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