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Report for CCDS14489.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
14489.1 Public Homo sapiens X ARMCX3 24 110 108 CCDS HistoryNCBI Gene:51566Re-query CCDS DB by CCDS ID:14489.1Re-query CCDS DB by GeneID:51566See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 14489.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000341189.8 ENSP00000340672.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000341189.8Link to Ensembl Protein Viewer:ENSP00000340672.4Re-query CCDS DB by Nucleotide ID:ENST00000341189Re-query CCDS DB by Protein ID:ENSP00000340672
Original member Current member EBI ENST00000537169.1 ENSP00000439032.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000537169.1Link to Ensembl Protein Viewer:ENSP00000439032.1Re-query CCDS DB by Nucleotide ID:ENST00000537169Re-query CCDS DB by Protein ID:ENSP00000439032
Original member Current member EBI ENST00000471229.7 ENSP00000454483.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000471229.7Link to Ensembl Protein Viewer:ENSP00000454483.1Re-query CCDS DB by Nucleotide ID:ENST00000471229Re-query CCDS DB by Protein ID:ENSP00000454483
Original member Current member NCBI NM_016607.4 NP_057691.1 Accepted alive Link to Nucleotide Sequence:NM_016607.4Link to Protein Sequence:NP_057691.1Re-query CCDS DB by Nucleotide ID:NM_016607Re-query CCDS DB by Protein ID:NP_057691Link to BLAST:NP_057691.1
Original member Current member NCBI NM_177947.3 NP_808816.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_177947.3Link to Protein Sequence:NP_808816.1Re-query CCDS DB by Nucleotide ID:NM_177947Re-query CCDS DB by Protein ID:NP_808816Link to BLAST:NP_808816.1
Original member Current member NCBI NM_177948.3 NP_808817.1 Accepted alive Link to Nucleotide Sequence:NM_177948.3Link to Protein Sequence:NP_808817.1Re-query CCDS DB by Nucleotide ID:NM_177948Re-query CCDS DB by Protein ID:NP_808817Link to BLAST:NP_808817.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_057691.1 379 Q9UH62 379 100% 0 0
NP_808816.1 379 Q9UH62 379 100% 0 0
NP_808817.1 379 Q9UH62 379 100% 0 0

Chromosomal Locations for CCDS 14489.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 101624980 101626119 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1140 nt):
ATGGGCTACGCCAGGAAAGTAGGCTGGGTGACCGCAGGCCTGGTGATTGGGGCTGGCGCCTGCTATTGCA
TTTATAGACTGACTAGGGGAAGAAAACAGAACAAGGAAAAAATGGCTGAGGGTGGATCTGGGGATGTGGA
TGATGCTGGGGACTGTTCTGGGGCCAGGTATAATGACTGGTCTGATGATGATGATGACAGCAATGAGAGC
AAGAGTATAGTATGGTACCCACCTTGGGCTCGGATTGGGACTGAAGCTGGAACCAGAGCTAGGGCCAGGG
CAAGGGCCAGGGCTACCCGGGCACGTCGGGCTGTCCAGAAACGGGCTTCCCCCAATTCAGATGATACCGT
TTTGTCCCCTCAAGAGCTACAAAAGGTTCTTTGCTTGGTTGAGATGTCTGAAAAGCCTTATATTCTTGAA
GCAGCTTTAATTGCTCTGGGTAACAATGCTGCTTATGCATTTAACAGAGATATTATTCGTGATCTGGGTG
GTCTCCCAATTGTCGCAAAGATTCTCAATACTCGGGATCCCATAGTTAAGGAAAAGGCTTTAATTGTCCT
GAATAACTTGAGTGTGAATGCTGAAAATCAGCGCAGGCTTAAAGTATACATGAATCAAGTGTGTGATGAC
ACAATCACTTCTCGCTTGAACTCATCTGTGCAGCTTGCTGGACTGAGATTGCTTACAAATATGACTGTTA
CTAATGAGTATCAGCACATGCTTGCTAATTCCATTTCTGACTTTTTTCGTTTATTTTCAGCGGGAAATGA
AGAAACCAAACTTCAGGTTCTGAAACTCCTTTTGAATTTGGCTGAAAATCCAGCCATGACTAGGGAACTG
CTCAGGGCCCAAGTACCATCTTCACTGGGCTCCCTCTTTAATAAGAAGGAGAACAAAGAAGTTATTCTTA
AACTTCTGGTCATATTTGAGAACATAAATGATAATTTCAAATGGGAAGAAAATGAACCTACTCAGAATCA
ATTCGGTGAAGGTTCACTTTTTTTCTTTTTAAAAGAATTTCAAGTGTGTGCTGATAAGGTTCTGGGAATA
GAAAGTCACCATGATTTTTTGGTGAAAGTAAAAGTTGGAAAATTCATGGCCAAACTTGCTGAACATATGT
TCCCAAAGAGCCAGGAATAA

Translation (379 aa):
MGYARKVGWVTAGLVIGAGACYCIYRLTRGRKQNKEKMAEGGSGDVDDAGDCSGARYNDWSDDDDDSNES
KSIVWYPPWARIGTEAGTRARARARARATRARRAVQKRASPNSDDTVLSPQELQKVLCLVEMSEKPYILE
AALIALGNNAAYAFNRDIIRDLGGLPIVAKILNTRDPIVKEKALIVLNNLSVNAENQRRLKVYMNQVCDD
TITSRLNSSVQLAGLRLLTNMTVTNEYQHMLANSISDFFRLFSAGNEETKLQVLKLLLNLAENPAMTREL
LRAQVPSSLGSLFNKKENKEVILKLLVIFENINDNFKWEENEPTQNQFGEGSLFFFLKEFQVCADKVLGI
ESHHDFLVKVKVGKFMAKLAEHMFPKSQE


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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