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Report for CCDS14457.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
14457.1 Public Homo sapiens X KLHL4 24 110 108 CCDS HistoryNCBI Gene:56062Re-query CCDS DB by CCDS ID:14457.1Re-query CCDS DB by GeneID:56062See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 14457.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000373119.9 ENSP00000362211.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000373119.9Link to Ensembl Protein Viewer:ENSP00000362211.4Re-query CCDS DB by Nucleotide ID:ENST00000373119Re-query CCDS DB by Protein ID:ENSP00000362211
Original member Current member EBI ENST00000652270.1 ENSP00000498718.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000652270.1Link to Ensembl Protein Viewer:ENSP00000498718.1Re-query CCDS DB by Nucleotide ID:ENST00000652270Re-query CCDS DB by Protein ID:ENSP00000498718
Original member Current member NCBI NM_019117.5 NP_061990.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_019117.5Link to Protein Sequence:NP_061990.2Re-query CCDS DB by Nucleotide ID:NM_019117Re-query CCDS DB by Protein ID:NP_061990Link to BLAST:NP_061990.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_061990.2 718 Q9C0H6-1 718 100% 0 0

Chromosomal Locations for CCDS 14457.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 87517894 87518315 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 87613877 87614044 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 87614434 87614570 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 87617932 87618128 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 87622211 87622423 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 87625610 87625796 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 87632210 87632434 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 87633749 87633911 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 87635563 87635775 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 87664764 87664935 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 87666475 87666534 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2157 nt):
ATGTCAGTGTCTGGCAAGAAAGAGTTTGATGTGAAACAGATCCTAAGGCTACGCTGGAGGTGGTTTAGTC
ATCCTTTTCAAGGTTCCACCAACACTGGAAGCTGTCTTCAGCAGGAAGGATATGAGCATAGAGGGACCCC
GGTTCAGGGCAGGTTGAAGAGCCACTCTCGGGACAGAAACGGACTGAAGAAAAGCAACAGTCCTGTCCAC
CACAATATACTGGCACCAGTGCCAGGACCGGCCCCTGCCCATCAGAGAGCCGTTCAGAATTTGCAGCAAC
ATAATCTGATAGTACATTTTCAAGCAAATGAAGATACTCCTAAATCAGTTCCAGAGAAGAATTTATTCAA
AGAAGCTTGTGAGAAACGCGCACAAGATTTGGAGATGATGGCTGATGACAATATAGAAGATTCTACAGCA
AGATTAGATACACAACACTCTGAAGACATGAATGCCACCAGATCTGAAGAGCAGTTCCATGTTATAAACC
ACGCAGAGCAAACTCTTCGTAAAATGGAGAACTACTTGAAAGAGAAACAACTATGTGATGTGCTACTGAT
TGCAGGACACCTCCGCATCCCAGCCCATAGGTTGGTTCTCAGCGCAGTGTCTGATTATTTTGCTGCAATG
TTTACTAATGATGTGCTTGAAGCCAAACAAGAAGAGGTCAGGATGGAAGGAGTAGATCCAAATGCACTAA
ATTCCTTGGTGCAGTATGCTTACACAGGAGTCCTGCAATTGAAAGAAGATACCATTGAAAGTTTGCTGGC
TGCAGCTTGTCTTCTGCAGCTGACTCAGGTCATTGATGTTTGCTCCAATTTTCTCATAAAGCAGCTCCAT
CCTTCAAACTGCTTAGGGATTCGATCATTTGGAGATGCCCAAGGCTGTACAGAACTTCTGAACGTGGCAC
ACAAATACACTATGGAACACTTCATTGAGGTAATAAAAAACCAAGAATTCCTCCTGCTTCCAGCTAATGA
AATTTCAAAACTTCTGTGCAGTGATGACATTAATGTGCCTGATGAAGAGACCATTTTTCATGCTCTAATG
CAGTGGGTGGGGCATGATGTGCAGAATAGGCAAGGAGAACTGGGGATGCTGCTTTCTTACATCAGACTGC
CATTACTCCCACCACAGTTACTGGCAGATCTTGAAACCAGTTCCATGTTTACTGGTGATCTTGAGTGTCA
GAAGCTCCTGATGGAAGCTATGAAGTATCATCTTTTGCCTGAGAGAAGATCCATGATGCAAAGCCCTCGG
ACAAAGCCTAGAAAATCAACTGTGGGGGCACTTTATGCTGTAGGAGGCATGGATGCTATGAAAGGTACTA
CTACTATTGAAAAATATGACCTCAGGACCAACAGTTGGCTACATATTGGCACCATGAATGGCCGTAGGCT
TCAATTTGGAGTCGCAGTTATTGATAATAAGCTCTATGTCGTGGGAGGAAGAGACGGTTTAAAAACTTTG
AATACAGTGGAATGTTTTAATCCAGTTGGCAAAATCTGGACTGTGATGCCTCCCATGTCAACACATCGGC
ACGGCTTAGGTGTAGCCACTCTTGAAGGACCAATGTATGCTGTAGGTGGTCATGATGGATGGAGCTATCT
AAATACTGTAGAAAGATGGGACCCTGAGGGACGACAGTGGAATTACGTAGCCAGTATGTCAACTCCTAGA
AGCACAGTTGGTGTTGTTGCATTAAACAACAAATTATATGCTATTGGTGGACGTGATGGAAGTTCCTGCC
TCAAATCAATGGAATACTTTGACCCACACACTAACAAGTGGAGTTTGTGTGCTCCAATGTCCAAAAGACG
TGGAGGTGTGGGAGTTGCCACATACAATGGATTCTTATATGTTGTAGGGGGGCATGATGCCCCTGCTTCC
AACCATTGCTCCAGGCTTTCTGACTGTGTGGAACGGTATGATCCAAAAGGTGATTCATGGTCAACTGTGG
CACCTCTGAGTGTTCCTCGAGATGCTGTTGCTGTGTGCCCTCTTGGAGACAAACTCTACGTGGTTGGAGG
ATATGACGGACATACTTATTTGAACACAGTTGAGTCATATGATGCACAGAGAAATGAATGGAAAGAGGAA
GTTCCTGTTAACATTGGAAGAGCTGGTGCATGTGTTGTAGTGGTGAAGCTACCCTAA

Translation (718 aa):
MSVSGKKEFDVKQILRLRWRWFSHPFQGSTNTGSCLQQEGYEHRGTPVQGRLKSHSRDRNGLKKSNSPVH
HNILAPVPGPAPAHQRAVQNLQQHNLIVHFQANEDTPKSVPEKNLFKEACEKRAQDLEMMADDNIEDSTA
RLDTQHSEDMNATRSEEQFHVINHAEQTLRKMENYLKEKQLCDVLLIAGHLRIPAHRLVLSAVSDYFAAM
FTNDVLEAKQEEVRMEGVDPNALNSLVQYAYTGVLQLKEDTIESLLAAACLLQLTQVIDVCSNFLIKQLH
PSNCLGIRSFGDAQGCTELLNVAHKYTMEHFIEVIKNQEFLLLPANEISKLLCSDDINVPDEETIFHALM
QWVGHDVQNRQGELGMLLSYIRLPLLPPQLLADLETSSMFTGDLECQKLLMEAMKYHLLPERRSMMQSPR
TKPRKSTVGALYAVGGMDAMKGTTTIEKYDLRTNSWLHIGTMNGRRLQFGVAVIDNKLYVVGGRDGLKTL
NTVECFNPVGKIWTVMPPMSTHRHGLGVATLEGPMYAVGGHDGWSYLNTVERWDPEGRQWNYVASMSTPR
STVGVVALNNKLYAIGGRDGSSCLKSMEYFDPHTNKWSLCAPMSKRRGGVGVATYNGFLYVVGGHDAPAS
NHCSRLSDCVERYDPKGDSWSTVAPLSVPRDAVAVCPLGDKLYVVGGYDGHTYLNTVESYDAQRNEWKEE
VPVNIGRAGACVVVVKLP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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