NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS14456.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
14456.1 Public Homo sapiens X KLHL4 24 110 108 CCDS HistoryNCBI Gene:56062Re-query CCDS DB by CCDS ID:14456.1Re-query CCDS DB by GeneID:56062See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 14456.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000373114.4 ENSP00000362206.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000373114.4Link to Ensembl Protein Viewer:ENSP00000362206.4Re-query CCDS DB by Nucleotide ID:ENST00000373114Re-query CCDS DB by Protein ID:ENSP00000362206
Original member Current member NCBI NM_057162.3 NP_476503.1 Accepted alive Link to Nucleotide Sequence:NM_057162.3Link to Protein Sequence:NP_476503.1Re-query CCDS DB by Nucleotide ID:NM_057162Re-query CCDS DB by Protein ID:NP_476503Link to BLAST:NP_476503.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_476503.1 720 Q9C0H6-2 720 100% 0 0

Chromosomal Locations for CCDS 14456.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 87517894 87518315 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 87613877 87614044 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 87614434 87614570 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 87617932 87618128 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 87622211 87622423 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 87625610 87625796 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 87632210 87632434 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 87633749 87633911 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 87635563 87635775 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 87664764 87664935 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 87669329 87669394 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2163 nt):
ATGTCAGTGTCTGGCAAGAAAGAGTTTGATGTGAAACAGATCCTAAGGCTACGCTGGAGGTGGTTTAGTC
ATCCTTTTCAAGGTTCCACCAACACTGGAAGCTGTCTTCAGCAGGAAGGATATGAGCATAGAGGGACCCC
GGTTCAGGGCAGGTTGAAGAGCCACTCTCGGGACAGAAACGGACTGAAGAAAAGCAACAGTCCTGTCCAC
CACAATATACTGGCACCAGTGCCAGGACCGGCCCCTGCCCATCAGAGAGCCGTTCAGAATTTGCAGCAAC
ATAATCTGATAGTACATTTTCAAGCAAATGAAGATACTCCTAAATCAGTTCCAGAGAAGAATTTATTCAA
AGAAGCTTGTGAGAAACGCGCACAAGATTTGGAGATGATGGCTGATGACAATATAGAAGATTCTACAGCA
AGATTAGATACACAACACTCTGAAGACATGAATGCCACCAGATCTGAAGAGCAGTTCCATGTTATAAACC
ACGCAGAGCAAACTCTTCGTAAAATGGAGAACTACTTGAAAGAGAAACAACTATGTGATGTGCTACTGAT
TGCAGGACACCTCCGCATCCCAGCCCATAGGTTGGTTCTCAGCGCAGTGTCTGATTATTTTGCTGCAATG
TTTACTAATGATGTGCTTGAAGCCAAACAAGAAGAGGTCAGGATGGAAGGAGTAGATCCAAATGCACTAA
ATTCCTTGGTGCAGTATGCTTACACAGGAGTCCTGCAATTGAAAGAAGATACCATTGAAAGTTTGCTGGC
TGCAGCTTGTCTTCTGCAGCTGACTCAGGTCATTGATGTTTGCTCCAATTTTCTCATAAAGCAGCTCCAT
CCTTCAAACTGCTTAGGGATTCGATCATTTGGAGATGCCCAAGGCTGTACAGAACTTCTGAACGTGGCAC
ACAAATACACTATGGAACACTTCATTGAGGTAATAAAAAACCAAGAATTCCTCCTGCTTCCAGCTAATGA
AATTTCAAAACTTCTGTGCAGTGATGACATTAATGTGCCTGATGAAGAGACCATTTTTCATGCTCTAATG
CAGTGGGTGGGGCATGATGTGCAGAATAGGCAAGGAGAACTGGGGATGCTGCTTTCTTACATCAGACTGC
CATTACTCCCACCACAGTTACTGGCAGATCTTGAAACCAGTTCCATGTTTACTGGTGATCTTGAGTGTCA
GAAGCTCCTGATGGAAGCTATGAAGTATCATCTTTTGCCTGAGAGAAGATCCATGATGCAAAGCCCTCGG
ACAAAGCCTAGAAAATCAACTGTGGGGGCACTTTATGCTGTAGGAGGCATGGATGCTATGAAAGGTACTA
CTACTATTGAAAAATATGACCTCAGGACCAACAGTTGGCTACATATTGGCACCATGAATGGCCGTAGGCT
TCAATTTGGAGTCGCAGTTATTGATAATAAGCTCTATGTCGTGGGAGGAAGAGACGGTTTAAAAACTTTG
AATACAGTGGAATGTTTTAATCCAGTTGGCAAAATCTGGACTGTGATGCCTCCCATGTCAACACATCGGC
ACGGCTTAGGTGTAGCCACTCTTGAAGGACCAATGTATGCTGTAGGTGGTCATGATGGATGGAGCTATCT
AAATACTGTAGAAAGATGGGACCCTGAGGGACGACAGTGGAATTACGTAGCCAGTATGTCAACTCCTAGA
AGCACAGTTGGTGTTGTTGCATTAAACAACAAATTATATGCTATTGGTGGACGTGATGGAAGTTCCTGCC
TCAAATCAATGGAATACTTTGACCCACACACTAACAAGTGGAGTTTGTGTGCTCCAATGTCCAAAAGACG
TGGAGGTGTGGGAGTTGCCACATACAATGGATTCTTATATGTTGTAGGGGGGCATGATGCCCCTGCTTCC
AACCATTGCTCCAGGCTTTCTGACTGTGTGGAACGGTATGATCCAAAAGGTGATTCATGGTCAACTGTGG
CACCTCTGAGTGTTCCTCGAGATGCTGTTGCTGTGTGCCCTCTTGGAGACAAACTCTACGTGGTTGGAGG
ATATGACGGACATACTTATTTGAACACAGTTGAGTCATATGATGCACAGAGAAATGAATGGAAAGAGAGC
ATGCAAGAACTTCTACAAAACTTCTATACCACACAGAAGCTGAAAGAGACTCTGGGGCACTAA

Translation (720 aa):
MSVSGKKEFDVKQILRLRWRWFSHPFQGSTNTGSCLQQEGYEHRGTPVQGRLKSHSRDRNGLKKSNSPVH
HNILAPVPGPAPAHQRAVQNLQQHNLIVHFQANEDTPKSVPEKNLFKEACEKRAQDLEMMADDNIEDSTA
RLDTQHSEDMNATRSEEQFHVINHAEQTLRKMENYLKEKQLCDVLLIAGHLRIPAHRLVLSAVSDYFAAM
FTNDVLEAKQEEVRMEGVDPNALNSLVQYAYTGVLQLKEDTIESLLAAACLLQLTQVIDVCSNFLIKQLH
PSNCLGIRSFGDAQGCTELLNVAHKYTMEHFIEVIKNQEFLLLPANEISKLLCSDDINVPDEETIFHALM
QWVGHDVQNRQGELGMLLSYIRLPLLPPQLLADLETSSMFTGDLECQKLLMEAMKYHLLPERRSMMQSPR
TKPRKSTVGALYAVGGMDAMKGTTTIEKYDLRTNSWLHIGTMNGRRLQFGVAVIDNKLYVVGGRDGLKTL
NTVECFNPVGKIWTVMPPMSTHRHGLGVATLEGPMYAVGGHDGWSYLNTVERWDPEGRQWNYVASMSTPR
STVGVVALNNKLYAIGGRDGSSCLKSMEYFDPHTNKWSLCAPMSKRRGGVGVATYNGFLYVVGGHDAPAS
NHCSRLSDCVERYDPKGDSWSTVAPLSVPRDAVAVCPLGDKLYVVGGYDGHTYLNTVESYDAQRNEWKES
MQELLQNFYTTQKLKETLGH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH