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Report for CCDS14452.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
14452.1 Public Homo sapiens X POF1B 24 110 108 CCDS HistoryNCBI Gene:79983Re-query CCDS DB by CCDS ID:14452.1Re-query CCDS DB by GeneID:79983See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 14452.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000262753.9 ENSP00000262753.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000262753.9Link to Ensembl Protein Viewer:ENSP00000262753.4Re-query CCDS DB by Nucleotide ID:ENST00000262753Re-query CCDS DB by Protein ID:ENSP00000262753
Original member Current member NCBI NM_024921.4 NP_079197.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_024921.4Link to Protein Sequence:NP_079197.3Re-query CCDS DB by Nucleotide ID:NM_024921Re-query CCDS DB by Protein ID:NP_079197Link to BLAST:NP_079197.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_079197.3 589 Q8WVV4-2 589 100% 0 0

Chromosomal Locations for CCDS 14452.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 85279421 85279426 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 85282203 85282317 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 85303406 85303488 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 85304343 85304471 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 85305791 85305910 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 85306181 85306333 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 85307163 85307276 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 85308124 85308216 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 85314432 85314506 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 85315707 85315734 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 85330949 85331079 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 85345860 85346042 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 85351350 85351451 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 85359550 85359630 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 85367692 85367766 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 85379173 85379454 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1770 nt):
ATGAGCTCGAGCTATTGGAGTGAGACGAGCAGCAGCAGCTGTGGAACCCAGCAGCTCCCAGAGGTGCTGC
AGTGCCAGCCCCAGCATTACCACTGCTACCATCAGTCAAGCCAAGCCCAGCAGCCTCCAGAAAAAAATGT
AGTGTATGAGCGAGTGAGGACCTACAGTGGGCCCATGAACAAGGTGGTGCAGGCCTTGGACCCCTTCAAC
TCACGGGAAGTGCTCTCCCCTCTCAAAACCACCTCCTCCTACCAAAATTTGGTTTGGAGCGACCATTCTC
AGGAACTCCATTCTCCAACTTTAAAAATATCTACATGTGCCCCAAGTACTCTACATATAACCCAAAATAC
TGAACAGGAACTTCATTCTCCAACAGTGAAACTTACTACATATCCACAGACCACTATTAGGAAATATGTA
GTACAAAATCCTGAACAGGAACCACTGTCTCAATTCCTAAGAGGAAGCCATTTCTTCCCAGGAAACAATG
TTATTTATGAAAAAACAATAAGAAAAGTGGAGAAGCTAAATACTGATCAGGGGTGCCATCCTCAGGCTCA
ATGCCATCATCACATTATCCAACAGCCCCAGGTCATCCACTCTGCACACTGGCAACAACCTGATTCTAGC
CAGCAAATCCAAGCCATCACAGGAAATAATCCAATTTCTACACATATTGGAAATGAACTGTGCCATAGTG
GATCAAGCCAGATTTGTGAGCAGGTGATAATTCAGGATGATGGCCCTGAAAAATTGGACCCCAGATATTT
TGGAGAGTTGCTTGCTGATCTGAGCCGTAAGAATACGGATCTATATCACTGCTTATTAGAACATTTGCAG
AGAATTGGAGGAAGCAAACAGGACTTTGAGTCTACAGATGAGTCGGAAGACATTGAATCATTGATTCCTA
AAGGATTATCAGAGTTTACAAAACAGCAAATACGCTACATTCTGCAGATGAGGGGTATGTCTGATAAGTC
ACTCCGACTAGTGCTGTCCACATTTAGCAACATACGGGAGGAGCTTGGACATCTTCAAAATGATATGACA
TCACTGGAAAATGACAAGATGAGACTTGAGAAAGATTTATCATTCAAAGACACTCAATTAAAAGAGTACG
AAGAACTCTTGGCATCAGTGAGAGCAAATAATCACCAGCAGCAGCAAGGACTTCAAGACTCAAGTTCAAA
ATGCCAGGCATTGGAAGAAAACAATCTCTCTCTTCGACATACACTATCAGACATGGAATACAGACTAAAA
GAACTGGAATATTGTAAACGTAATTTAGAGCAAGAGAATCAAAACCTTAGAATGCAGGTTTCTGAGACTT
GCACAGGCCCAATGTTGCAGGCTAAAATGGATGAGATTGGCAACCACTACACGGAGATGGTAAAAAACTT
GAGAATGGAGAAAGATAGAGAGATCTGCAGACTGAGGTCCCAATTAAACCAGTACCATAAAGATGTTTCA
AAGAGAGAAGGAAGTTGTAGTGACTTCCAATTTAAGCTTCATGAACTGACAAGCTTGCTGGAAGAGAAGG
ATTCCCTCATAAAGCGTCAGTCAGAGGAACTCTCCAAGTTGCGGCAAGAAATATATTCCTCTCATAACCA
ACCCTCCACTGGTGGAAGGACTACTATTACCACTAAAAAGTACAGGACACAATATCCAATCCTAGGCCTC
CTATATGATGACTACGAATATATACCACCAGGTAGTGAAACACAGACTATTGTGATTGAGAAAACAGAAG
ACAAATACACTTGTCCATGA

Translation (589 aa):
MSSSYWSETSSSSCGTQQLPEVLQCQPQHYHCYHQSSQAQQPPEKNVVYERVRTYSGPMNKVVQALDPFN
SREVLSPLKTTSSYQNLVWSDHSQELHSPTLKISTCAPSTLHITQNTEQELHSPTVKLTTYPQTTIRKYV
VQNPEQEPLSQFLRGSHFFPGNNVIYEKTIRKVEKLNTDQGCHPQAQCHHHIIQQPQVIHSAHWQQPDSS
QQIQAITGNNPISTHIGNELCHSGSSQICEQVIIQDDGPEKLDPRYFGELLADLSRKNTDLYHCLLEHLQ
RIGGSKQDFESTDESEDIESLIPKGLSEFTKQQIRYILQMRGMSDKSLRLVLSTFSNIREELGHLQNDMT
SLENDKMRLEKDLSFKDTQLKEYEELLASVRANNHQQQQGLQDSSSKCQALEENNLSLRHTLSDMEYRLK
ELEYCKRNLEQENQNLRMQVSETCTGPMLQAKMDEIGNHYTEMVKNLRMEKDREICRLRSQLNQYHKDVS
KREGSCSDFQFKLHELTSLLEEKDSLIKRQSEELSKLRQEIYSSHNQPSTGGRTTITTKKYRTQYPILGL
LYDDYEYIPPGSETQTIVIEKTEDKYTCP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
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