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Report for CCDS14278.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
14278.1 Public Homo sapiens X ZNF157 24 110 108 CCDS HistoryNCBI Gene:7712Re-query CCDS DB by CCDS ID:14278.1Re-query CCDS DB by GeneID:7712See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 14278.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000377073.4 ENSP00000366273.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000377073.4Link to Ensembl Protein Viewer:ENSP00000366273.4Re-query CCDS DB by Nucleotide ID:ENST00000377073Re-query CCDS DB by Protein ID:ENSP00000366273
Original member Current member NCBI NM_003446.4 NP_003437.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_003446.4Link to Protein Sequence:NP_003437.2Re-query CCDS DB by Nucleotide ID:NM_003446Re-query CCDS DB by Protein ID:NP_003437Link to BLAST:NP_003437.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_003437.2 506 P51786 506 100% 0 0

Chromosomal Locations for CCDS 14278.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 47370669 47370740 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 47410276 47410402 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 47410680 47410775 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 47412369 47413594 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1521 nt):
ATGCCAGCTAATGGGACATCACCCCAGAGATTCCCTGCCCTGATTCCAGGAGAACCTGGCAGATCTTTTG
AGGGGTCCGTGTCATTCGAGGATGTGGCTGTGGATTTCACCCGACAGGAGTGGCACAGACTGGACCCTGC
TCAGAGGACCATGCACAAGGATGTGATGCTGGAGACCTACAGCAACCTGGCATCTGTGGGCCTCTGCGTG
GCCAAACCAGAGATGATCTTCAAGTTGGAGCGAGGAGAAGAGCTGTGGATATTAGAGGAGGAATCCTCAG
GCCATGGTTACTCAGGATCTCTCTCACTGCTGTGTGGCAATGGTTCTGTTGGGGATAATGCCCTCAGGCA
TGATAATGACCTTCTTCACCATCAGAAGATTCAAACATTGGATCAAAATGTTGAATATAATGGATGCAGG
AAAGCCTTCCATGAGAAAACAGGCTTTGTTAGACGTAAAAGAACACCCAGAGGAGATAAAAACTTTGAAT
GTCATGAATGTGGGAAAGCTTACTGTAGGAAGTCAAACCTTGTTGAACATCTGAGAATACACACAGGAGA
GAGACCCTATGAATGCGGTGAATGTGCAAAAACCTTCAGTGCAAGATCATACCTCATTGCTCATCAGAAA
ACTCACACAGGGGAGAGGCCCTTTGAATGTAATGAATGTGGGAAATCTTTTGGCAGGAAGTCACAACTCA
TCCTACATACAAGAACACACACTGGAGAGAGACCCTATGAATGTACTGAATGTGGGAAAACCTTTTCTGA
GAAGGCAACCCTCACGATTCATCAGAGAACTCACACAGGGGAGAAACCCTATGAATGTAGTGAATGTGGG
AAAACATTTCGTGTAAAGATATCCCTTACCCAACACCACAGAACTCATACAGGGGAGAAACCTTATGAAT
GTGGGGAGTGTGGGAAAAACTTCCGTGCAAAGAAATCCCTAAATCAGCATCAAAGAATTCACACAGGTGA
GAAACCCTATGAGTGTGGTGAATGTGGGAAATTCTTCCGAATGAAGATGACTCTCAATAATCATCAAAGA
ACTCACACAGGTGAAAAGCCCTATCAGTGTAATGAATGTGGGAAATCTTTCAGGGTGCACTCATCTCTTG
GGATCCATCAGAGAATTCACACAGGAGAGAAACCTTACGAATGTAATGAGTGTGGTAATGCTTTCTATGT
GAAAGCACGCCTAATTGAACATCAGAGGATGCATTCAGGAGAGAAACCCTACGAATGTAGTGAATGTGGG
AAAATCTTCAGTATGAAGAAATCCCTTTGTCAACACCGGAGAACTCACACAGGAGAGAAACCTTATGAAT
GTAGTGAATGTGGAAATGCCTTCTATGTGAAAGTACGCCTCATTGAACATCAGCGAATTCACACAGGAGA
GAGACCCTTTGAGTGTCAAGAATGTGGGAAAGCTTTCTGCCGGAAAGCACACCTCACAGAACATCAGAGA
ACTCACATAGGCTGGTCCTGGCGTTGTACAATGAAGAAAGCCTCTCACTGA

Translation (506 aa):
MPANGTSPQRFPALIPGEPGRSFEGSVSFEDVAVDFTRQEWHRLDPAQRTMHKDVMLETYSNLASVGLCV
AKPEMIFKLERGEELWILEEESSGHGYSGSLSLLCGNGSVGDNALRHDNDLLHHQKIQTLDQNVEYNGCR
KAFHEKTGFVRRKRTPRGDKNFECHECGKAYCRKSNLVEHLRIHTGERPYECGECAKTFSARSYLIAHQK
THTGERPFECNECGKSFGRKSQLILHTRTHTGERPYECTECGKTFSEKATLTIHQRTHTGEKPYECSECG
KTFRVKISLTQHHRTHTGEKPYECGECGKNFRAKKSLNQHQRIHTGEKPYECGECGKFFRMKMTLNNHQR
THTGEKPYQCNECGKSFRVHSSLGIHQRIHTGEKPYECNECGNAFYVKARLIEHQRMHSGEKPYECSECG
KIFSMKKSLCQHRRTHTGEKPYECSECGNAFYVKVRLIEHQRIHTGERPFECQECGKAFCRKAHLTEHQR
THIGWSWRCTMKKASH


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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