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Report for CCDS14259.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
14259.1 Public Homo sapiens X GPR82 24 110 108 CCDS HistoryNCBI Gene:27197Re-query CCDS DB by CCDS ID:14259.1Re-query CCDS DB by GeneID:27197See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 14259.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000302548.5 ENSP00000303549.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000302548.5Link to Ensembl Protein Viewer:ENSP00000303549.4Re-query CCDS DB by Nucleotide ID:ENST00000302548Re-query CCDS DB by Protein ID:ENSP00000303549
Original member Current member NCBI NM_080817.5 NP_543007.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_080817.5Link to Protein Sequence:NP_543007.1Re-query CCDS DB by Nucleotide ID:NM_080817Re-query CCDS DB by Protein ID:NP_543007Link to BLAST:NP_543007.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_543007.1 336 Q96P67 336 100% 0 0

Chromosomal Locations for CCDS 14259.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 41727027 41728037 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1011 nt):
ATGAACAACAATACAACATGTATTCAACCATCTATGATCTCTTCCATGGCTTTACCAATCATTTACATCC
TCCTTTGTATTGTTGGTGTTTTTGGAAACACTCTCTCTCAATGGATATTTTTAACAAAAATAGGTAAAAA
AACATCAACGCACATCTACCTGTCACACCTTGTGACTGCAAACTTACTTGTGTGCAGTGCCATGCCTTTC
ATGAGTATCTATTTCCTGAAAGGTTTCCAATGGGAATATCAATCTGCTCAATGCAGAGTGGTCAATTTTC
TGGGAACTCTATCCATGCATGCAAGTATGTTTGTCAGTCTCTTAATTTTAAGTTGGATTGCCATAAGCCG
CTATGCTACCTTAATGCAAAAGGATTCCTCGCAAGAGACTACTTCATGCTATGAGAAAATATTTTATGGC
CATTTACTGAAAAAATTTCGCCAGCCCAACTTTGCTAGAAAACTATGCATTTACATATGGGGAGTTGTAC
TGGGCATAATCATTCCAGTTACCGTATACTACTCAGTCATAGAGGCTACAGAAGGAGAAGAGAGCCTATG
CTACAATCGGCAGATGGAACTAGGAGCCATGATCTCTCAGATTGCAGGTCTCATTGGAACCACATTTATT
GGATTTTCCTTTTTAGTAGTACTAACATCATACTACTCTTTTGTAAGCCATCTGAGAAAAATAAGAACCT
GTACGTCCATTATGGAGAAAGATTTGACTTACAGTTCTGTGAAAAGACATCTTTTGGTCATCCAGATTCT
ACTAATAGTTTGCTTCCTTCCTTATAGTATTTTTAAACCCATTTTTTATGTTCTACACCAAAGAGATAAC
TGTCAGCAATTGAATTATTTAATAGAAACAAAAAACATTCTCACCTGTCTTGCTTCGGCCAGAAGTAGCA
CAGACCCCATTATATTTCTTTTATTAGATAAAACATTCAAGAAGACACTATATAATCTCTTTACAAAGTC
TAATTCAGCACATATGCAATCATATGGTTGA

Translation (336 aa):
MNNNTTCIQPSMISSMALPIIYILLCIVGVFGNTLSQWIFLTKIGKKTSTHIYLSHLVTANLLVCSAMPF
MSIYFLKGFQWEYQSAQCRVVNFLGTLSMHASMFVSLLILSWIAISRYATLMQKDSSQETTSCYEKIFYG
HLLKKFRQPNFARKLCIYIWGVVLGIIIPVTVYYSVIEATEGEESLCYNRQMELGAMISQIAGLIGTTFI
GFSFLVVLTSYYSFVSHLRKIRTCTSIMEKDLTYSSVKRHLLVIQILLIVCFLPYSIFKPIFYVLHQRDN
CQQLNYLIETKNILTCLASARSSTDPIIFLLLDKTFKKTLYNLFTKSNSAHMQSYG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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