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Report for CCDS14122.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
14122.1 Public Homo sapiens X ARSL 24 110 108 CCDS HistoryNCBI Gene:415Re-query CCDS DB by CCDS ID:14122.1Re-query CCDS DB by GeneID:415See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 14122.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000381134.9 ENSP00000370526.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000381134.9Link to Ensembl Protein Viewer:ENSP00000370526.3Re-query CCDS DB by Nucleotide ID:ENST00000381134Re-query CCDS DB by Protein ID:ENSP00000370526
Original member Current member EBI ENST00000540563.6 ENSP00000438198.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000540563.6Link to Ensembl Protein Viewer:ENSP00000438198.2Re-query CCDS DB by Nucleotide ID:ENST00000540563Re-query CCDS DB by Protein ID:ENSP00000438198
Original member Current member NCBI NM_000047.3 NP_000038.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_000047.3Link to Protein Sequence:NP_000038.2Re-query CCDS DB by Nucleotide ID:NM_000047Re-query CCDS DB by Protein ID:NP_000038Link to BLAST:NP_000038.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_000038.2 589 P51690 589 100% 0 0

Chromosomal Locations for CCDS 14122.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 2934832 2935190 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 2936742 2936863 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 2938095 2938257 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 2943065 2943199 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 2945998 2946134 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 2949304 2949727 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 2953143 2953265 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 2955416 2955537 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 2958274 2958435 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 2960378 2960400 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1770 nt):
ATGTTACATCTGCACCATTCTTGTTTGTGTTTCAGGAGCTGGCTGCCAGCGATGCTCGCTGTACTGCTAA
GTTTGGCACCATCAGCTTCCAGCGACATTTCCGCCTCCCGACCGAACATCCTTCTTCTGATGGCGGACGA
CCTTGGCATTGGGGACATTGGCTGCTATGGCAACAACACCATGAGGACTCCGAATATTGACCGCCTTGCA
GAGGACGGCGTGAAGCTGACCCAACACATCTCTGCCGCATCTTTGTGCACCCCAAGCAGAGCCGCCTTCC
TCACGGGCAGATACCCTGTGCGATCAGGGATGGTTTCCAGCATTGGTTACCGTGTTCTTCAGTGGACCGG
AGCATCTGGAGGTCTTCCAACAAATGAGACAACTTTTGCAAAAATACTGAAAGAGAAAGGCTATGCCACT
GGACTCATTGGAAAATGGCATCTGGGTCTCAACTGTGAGTCAGCCAGTGATCATTGCCACCACCCTCTCC
ATCATGGCTTTGACCATTTCTACGGAATGCCTTTCTCCTTGATGGGTGATTGCGCCCGCTGGGAACTCTC
AGAGAAGCGTGTCAACCTGGAACAAAAACTCAACTTCCTCTTCCAAGTCCTGGCCTTGGTTGCCCTCACA
CTGGTAGCAGGGAAGCTCACACACCTGATACCCGTCTCGTGGATGCCGGTCATCTGGTCAGCCCTTTCGG
CCGTCCTCCTCCTCGCAAGCTCCTATTTTGTGGGTGCTCTGATTGTCCATGCCGATTGCTTTCTGATGAG
AAACCACACCATCACGGAGCAGCCCATGTGCTTCCAAAGAACGACACCCCTTATTCTGCAGGAGGTTGCG
TCCTTTCTCAAAAGGAATAAGCATGGGCCTTTCCTCCTCTTTGTTTCCTTTCTACACGTTCACATCCCTC
TTATCACTATGGAGAACTTCCTCGGGAAGAGTCTCCACGGGCTGTATGGGGACAACGTAGAGGAGATGGA
CTGGATGGTAGGACGGATCCTTGACACTTTGGACGTGGAGGGTTTGAGCAACAGCACCCTCATTTATTTT
ACGTCGGATCACGGCGGTTCCCTAGAGAATCAACTTGGAAACACCCAGTATGGTGGCTGGAATGGAATTT
ATAAAGGTGGGAAGGGCATGGGAGGATGGGAAGGTGGGATCCGCGTGCCCGGGATCTTCCGCTGGCCCGG
GGTGCTCCCGGCCGGCCGAGTGATTGGCGAGCCCACGAGTCTGATGGACGTGTTCCCCACCGTGGTCCGG
CTGGCGGGCGGCGAGGTGCCCCAGGACAGAGTGATTGACGGCCAAGACCTTCTGCCCTTGCTCCTGGGGA
CAGCCCAACACTCAGACCACGAGTTCCTGATGCATTATTGTGAGAGGTTTCTGCACGCAGCCAGGTGGCA
TCAACGGGACAGAGGAACAATGTGGAAAGTCCACTTTGTGACGCCTGTGTTCCAGCCAGAGGGAGCCGGT
GCCTGCTATGGAAGAAAGGTCTGCCCGTGCTTTGGGGAAAAAGTAGTCCACCACGATCCACCTTTGCTCT
TTGACCTCTCAAGAGACCCTTCTGAGACCCACATCCTCACACCAGCCTCAGAGCCCGTGTTCTATCAGGT
GATGGAACGAGTCCAGCAGGCGGTGTGGGAACACCAGCGGACACTCAGCCCAGTTCCTCTGCAGCTGGAC
AGGCTGGGCAACATCTGGAGACCGTGGCTGCAGCCCTGCTGTGGCCCGTTCCCCCTCTGCTGGTGCCTTA
GGGAAGATGACCCACAATAA

Translation (589 aa):
MLHLHHSCLCFRSWLPAMLAVLLSLAPSASSDISASRPNILLLMADDLGIGDIGCYGNNTMRTPNIDRLA
EDGVKLTQHISAASLCTPSRAAFLTGRYPVRSGMVSSIGYRVLQWTGASGGLPTNETTFAKILKEKGYAT
GLIGKWHLGLNCESASDHCHHPLHHGFDHFYGMPFSLMGDCARWELSEKRVNLEQKLNFLFQVLALVALT
LVAGKLTHLIPVSWMPVIWSALSAVLLLASSYFVGALIVHADCFLMRNHTITEQPMCFQRTTPLILQEVA
SFLKRNKHGPFLLFVSFLHVHIPLITMENFLGKSLHGLYGDNVEEMDWMVGRILDTLDVEGLSNSTLIYF
TSDHGGSLENQLGNTQYGGWNGIYKGGKGMGGWEGGIRVPGIFRWPGVLPAGRVIGEPTSLMDVFPTVVR
LAGGEVPQDRVIDGQDLLPLLLGTAQHSDHEFLMHYCERFLHAARWHQRDRGTMWKVHFVTPVFQPEGAG
ACYGRKVCPCFGEKVVHHDPPLLFDLSRDPSETHILTPASEPVFYQVMERVQQAVWEHQRTLSPVPLQLD
RLGNIWRPWLQPCCGPFPLCWCLREDDPQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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